Pairwise Alignments

Query, 251 a.a., AraC-type DNA-binding domain-containing proteins from Pseudomonas stutzeri RCH2

Subject, 252 a.a., Transcriptional regulator, AraC family from Pseudomonas fluorescens GW456-L13

 Score =  109 bits (272), Expect = 6e-29
 Identities = 86/253 (33%), Positives = 120/253 (47%), Gaps = 19/253 (7%)

Query: 6   LLRLDDQTHQ---HAHDYHQLVMSLSGRAEFEVNGTGGEVCRMRACLVPGDADHGFAGMG 62
           +L L   +H    H+H++ QLV  LSG  +FEV+G G +V +    +VP  A H      
Sbjct: 4   ILTLRQYSHDLIVHSHEHAQLVFGLSGALDFEVDGRGSQVVQQSFVVVPSGAHHACGSTN 63

Query: 63  DNRMLIIDLDE-----QDVGTEDPELLARLFEAPRYPALDADFQNLLAYAGAELARYGSD 117
            +R L++D+       Q +G         L  A R P LDA    L+++          D
Sbjct: 64  GSRCLVLDVPSEQWVAQSLGDHAESSRRLLDNAGRLP-LDAGQSQLVSWLANSPV---DD 119

Query: 118 PLLARALGGVLLRALHLRLFGESLQRPVGP--LDIQRLDSHIQDNLARRITVAELAQVVC 175
           PL+A+  G VLL    L     +    VG   L    L++HI    A  + VA+LA+V  
Sbjct: 120 PLIAQQ-GAVLL----LASLNNARPEAVGGRRLPYAALNAHIDQYAAYPLQVADLARVAG 174

Query: 176 LSPSHFHAQFKDCVGLTPHQYLLKTRLDRAARLLRETPLPLVRIAEECGFSSQSALTTAT 235
           LS +  HA+F    G TP  Y+   RL  A  LLR + LP+  IA   G+SSQSA   A 
Sbjct: 175 LSSARLHARFVAECGQTPMDYIRSRRLHIAVGLLRNSALPIGEIASRVGYSSQSAFAAAV 234

Query: 236 RRYLGLTPRGLRK 248
            R  G +P  LR+
Sbjct: 235 LREFGASPGKLRR 247