Pairwise Alignments

Query, 1053 a.a., L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) (from data) from Pseudomonas stutzeri RCH2

Subject, 1320 a.a., trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase from Escherichia coli ECRC100

 Score =  921 bits (2380), Expect = 0.0
 Identities = 510/1039 (49%), Positives = 672/1039 (64%), Gaps = 42/1039 (4%)

Query: 23   AISANYSVDEAQYLTELLQLADPGEAGIAAIRERARSLIEAVRGRDNA---VDTLDALLR 79
            AI+A Y   E + ++ LL+ A   +       + A  L + +R + NA      +  LL+
Sbjct: 94   AITAAYRRPETEAVSMLLEQARLPQPVAEQAHKLAYQLADKLRNQKNASGRAGMVQGLLQ 153

Query: 80   QYSLDTQEGLMLMCLAEALLRVPDAATADALIRDKLNAAEWERHLGQSDNVLVNFAAWGL 139
            ++SL +QEG+ LMCLAEALLR+PD AT DALIRDK++   W+ H+G+S ++ VN A WGL
Sbjct: 154  EFSLSSQEGVALMCLAEALLRIPDKATRDALIRDKISNGNWQSHIGRSPSLFVNAATWGL 213

Query: 140  VMTGKVVDPETADGRPKNVIGRLLKRSGEPVIRGAMNQAMKLMGKQFVLGRTISEALKNG 199
            + TGK+V         ++ + R++ +SGEP+IR  ++ AM+LMG+QFV G TI+EAL N 
Sbjct: 214  LFTGKLVSTHNEASLSRS-LNRIIGKSGEPLIRKGVDMAMRLMGEQFVTGETIAEALANA 272

Query: 200  RPEREKGYTYSFDMLGEAALTAEDAAKYMADYRQAVETVGAEPQVGKG--PRPSVSIKLS 257
            R   EKG+ YS+DMLGEAALTA DA  YM  Y+QA+  +G     G+G    P +SIKLS
Sbjct: 273  RKLEEKGFRYSYDMLGEAALTAADAQAYMVSYQQAIHAIGKASN-GRGIYEGPGISIKLS 331

Query: 258  ALHPRYELAQRERVLTELFGSVRELAILARRLNVGITIDAEEADRLELSLELYEKLLRDP 317
            ALHPRY  AQ +RV+ EL+  ++ L +LAR+ ++GI IDAEEADRLE+SL+L EKL  +P
Sbjct: 332  ALHPRYSRAQYDRVMEELYPRLKSLTLLARQYDIGINIDAEEADRLEISLDLLEKLCFEP 391

Query: 318  AIAGWGEFGLVIQAYSKRCLPVLVWLTLLGRELGERIPLRLVKGAYWDSEIKQCQVQGLD 377
             +AGW   G VIQAY KRC  V+ +L  L      R+ +RLVKGAYWDSEIK+ Q+ GL+
Sbjct: 392  ELAGWNGIGFVIQAYQKRCPLVIDYLIDLATRSRRRLMIRLVKGAYWDSEIKRAQMDGLE 451

Query: 378  GYPVYTRKEGTDTSYLACARYLLSEHTRGVIYPQFASHNAHTVSCILAMAEETAQPREFE 437
            GYPVYTRK  TD SYLACA+ LL+     +IYPQFA+HNAHT++ I  +A +   P ++E
Sbjct: 452  GYPVYTRKVYTDVSYLACAKKLLA--VPNLIYPQFATHNAHTLAAIYQLAGQNYYPGQYE 509

Query: 438  FQRLHGMGDALYDTVIEKYA-----RNVRIYAPVGAHKDLLPYLVRRLLENGANSSFVHQ 492
            FQ LHGMG+ LY+ V  K A     R  RIYAPVG H+ LL YLVRRLLENGAN+SFV++
Sbjct: 510  FQCLHGMGEPLYEQVTGKVADGKLNRPCRIYAPVGTHETLLAYLVRRLLENGANTSFVNR 569

Query: 493  LVDPRVPVESLIDHPVTQLRRFAAP------GNPRIPLPPALFGN-RKNSQGINMNIQNQ 545
            + D  +P++ L+  PVT + + A         +P+IPLP  L+G+ R NS G+++  +++
Sbjct: 570  IADTSLPLDELVADPVTAVEKLAQQEGQTGLPHPKIPLPRDLYGHGRDNSAGLDLANEHR 629

Query: 546  WTELASAYQPFLERQWQAAPVISGRTLAGTPSEVRCPYELNKVVGQAQFASADQARQAID 605
               L+SA      ++WQA P++     AG  S V  P E   +VG  + A+  +  QA++
Sbjct: 630  LASLSSALLNSALQKWQALPMLEQPVAAGEMSPVINPAEPKDIVGYVREATPREVEQALE 689

Query: 606  RLAAYWPIWNATPVEARAAVLERLGDLLEQHRAELMALCTVEAGKSLQDGIDEVREAVDF 665
                  PIW ATP   RAA+L R   L+E    +L+ +   EAGK+  + I EVREAVDF
Sbjct: 690  SAVNNAPIWFATPPAERAAILHRAAVLMESQMQQLIGILVREAGKTFSNAIAEVREAVDF 749

Query: 666  CRYYAQQARLKLGREELKGPTGERNELFHEGRGVFVCVSPWNFPLAIYLGQITAALVAGN 725
              YYA Q R     E             H   G  VC+SPWNFPLAI+ GQI AAL AGN
Sbjct: 750  LHYYAGQVRDDFANET------------HRPLGPVVCISPWNFPLAIFTGQIAAALAAGN 797

Query: 726  TVLAKPAEQTSLIAARALELMFEAGLPQEAIAFLPGDGATLGGVFCRDPRVVGVCFTGST 785
            +VLAKPAEQT LIAA+ + ++ EAG+P   +  LPG G T+G     D RV GV FTGST
Sbjct: 798  SVLAKPAEQTPLIAAQGIAILLEAGVPPGVVQLLPGRGETVGAQLTGDDRVRGVMFTGST 857

Query: 786  DTARIINRQLAEK---EGPIATLIAETGGQNAMIVDSTALPEQVIKDAVGSAFTSAGQRC 842
            + A ++ R +A +   +G    LIAETGG NAMIVDS+AL EQV+ D + SAF SAGQRC
Sbjct: 858  EVATLLQRNIASRLDAQGRPIPLIAETGGMNAMIVDSSALTEQVVIDVLASAFDSAGQRC 917

Query: 843  SALRVLYVQRDIADRVIDLLKGAMAELRVGPTHLRENDIGPVIDQEAREGLLAHIQQLKS 902
            SALRVL +Q +IAD  + +L+GAMAE R+G       DIGPVID EA+  +  HIQ ++S
Sbjct: 918  SALRVLCLQDEIADHTLKMLRGAMAECRMGNPGRLTTDIGPVIDSEAKANIERHIQTMRS 977

Query: 903  EGRLIAEAT------VPAGLNGHFVAPVAFEIDGIHQLKKEHFGPVLHVVRYDAADLEKV 956
            +GR + +A            +G FVAP   E+D   +L+KE FGPVLHVVRY+   L ++
Sbjct: 978  KGRPVFQAVRENSEDAREWQSGTFVAPTLIELDDFAELQKEVFGPVLHVVRYNRNQLPEL 1037

Query: 957  VAAINGTGYGLTLGVHSRNEETAERIEQLARVGNLYVNRNQIGAVVGVQPFGGCRLSGTG 1016
            +  IN +GYGLTLGVH+R +ET  ++   A VGNLYVNRN +GAVVGVQPFGG  LSGTG
Sbjct: 1038 IEQINASGYGLTLGVHTRIDETIAQVTGSAHVGNLYVNRNMVGAVVGVQPFGGEGLSGTG 1097

Query: 1017 PKAGGPSYLLRFANERTTS 1035
            PKAGGP YL R    R  S
Sbjct: 1098 PKAGGPLYLYRLLANRPES 1116



 Score = 35.4 bits (80), Expect = 3e-05
 Identities = 24/55 (43%), Positives = 30/55 (54%), Gaps = 13/55 (23%)

Query: 999  GAVVGVQPFGGCRLSGTGPKAGGPSYLL--RFANERTTSTNTTAVGGNASLLSLG 1051
            GA+V VQ F           A G S +L  R   ER+ S NT A GGNASL+++G
Sbjct: 1277 GAIVSVQGF-----------ARGESNILLERLYIERSLSVNTAAAGGNASLMTIG 1320



 Score = 31.2 bits (69), Expect = 5e-04
 Identities = 52/207 (25%), Positives = 81/207 (39%), Gaps = 47/207 (22%)

Query: 618  PVEA--RAAVLERLGDLLE--QHRAELMALCTVEAGKSLQDGIDEVREAVDFCRYYAQQA 673
            PV+A  +AA+ + L  L E   +R EL ALCT + G+  Q G   +              
Sbjct: 1130 PVDAQLKAALTQPLNALREWAANRPELQALCT-QYGELAQAGTQRL-------------- 1174

Query: 674  RLKLGREELKGPTGERNELFHEGRGVFVCVSPWNFPLAIYLGQITAALVAGNTVL-AKPA 732
                    L GPTGERN      R   +C++         L Q+ A L  G+ VL    A
Sbjct: 1175 --------LPGPTGERNTWTLLPRERVLCIADDEQDA---LTQLAAVLAVGSQVLWPDDA 1223

Query: 733  EQTSLIAARALELMFEAGLPQ-EAIAFLPGDGATLGGVFCRDPRVVGVCFTGSTDTARII 791
                L+ A    +     L + E I   P D                V F G +D  R +
Sbjct: 1224 LHRQLVKALPSTVSERIQLAKAENITAQPFD---------------AVIFHGDSDQLRAL 1268

Query: 792  NRQLAEKEGPIATLIAETGGQNAMIVD 818
               +A ++G I ++     G++ ++++
Sbjct: 1269 CEAVAARDGAIVSVQGFARGESNILLE 1295