Pairwise Alignments

Query, 682 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

Subject, 686 a.a., Protein PilJ from Pseudomonas putida KT2440

 Score =  910 bits (2352), Expect = 0.0
 Identities = 485/673 (72%), Positives = 571/673 (84%)

Query: 4   INANALLSGVRSNTLTTGLFVVLVVSIVLLFANFAYVNTQADHDNEYIAHAGELRVLSQQ 63
           + A  +    RS    T LF++L++SI+LLFANFAY+NTQ+++D +YI HAGELRVLSQ+
Sbjct: 8   VTATTVSPRTRSIAQITVLFLILILSIILLFANFAYLNTQSNYDKQYIGHAGELRVLSQR 67

Query: 64  IAKDAVEAATGTQEAFASLKQARNDFNQRWGYLAQGNESIGLPAVPESLRTEVNAVEQDW 123
           IAK+A EAATG   AF  L  ARNDF +RWGYL QG++S GLP  P ++R E+ +V +DW
Sbjct: 68  IAKNATEAATGKALAFKLLSDARNDFERRWGYLRQGDKSTGLPPAPPAVRDEMESVRRDW 127

Query: 124 NTLRRDTDAILSSEQTVLSLHQVASTLAETIPQLQVEYEEVVDILLESGAPAAQVSVAQR 183
             LR++TD IL+SEQTVLSLHQVA+TLAET+PQLQVEYE+VV+ILL+SGAPA QV+VAQR
Sbjct: 128 ENLRKNTDIILASEQTVLSLHQVAATLAETVPQLQVEYEKVVEILLQSGAPANQVAVAQR 187

Query: 184 QSLLAERILGSVNKVLSGDQDSVQAADMFGRDASLFGRVLNAMIEGNVAMGITAVADDEA 243
           Q LLAERILGSVN VL+GD  + QAAD FGRDA  FG+VL  MI GN  + +T V D +A
Sbjct: 188 QLLLAERILGSVNTVLAGDDSAAQAADAFGRDAGRFGQVLEGMINGNATIQVTRVEDADA 247

Query: 244 RDRLSEIAELFQFVSGSVDEILETSPELFQVRESANSIFEVSQTLLDKTSALSQGLQNRA 303
           R RL+EIAELFQFV+GSVDEILETSPELF+VRE+A +IF +SQTLLD+ S L+ G +N A
Sbjct: 248 RARLAEIAELFQFVAGSVDEILETSPELFRVREAAGNIFSLSQTLLDEASHLANGFENLA 307

Query: 304 DARYLNTILGYVLGALALASIILIGLVMVQEARRRLSETAEKNERNQAAILRLLDEIGDL 363
             R L+T+ GYVLG LALASIILIGLVMV+   R+L ETAEKNERNQ AI+RLLDEI +L
Sbjct: 308 GGRTLDTVGGYVLGLLALASIILIGLVMVRTTNRQLRETAEKNERNQQAIMRLLDEIEEL 367

Query: 364 ADGDLTVAATVTEDFTGAIADSINYSIDQLRELVATINQTAVQVSGAAQETQATAMHLAE 423
           ADGDLTV  +VTEDFTGAIADSINYS+DQLR+LVATIN +AVQV+ A Q+TQ TA  LA+
Sbjct: 368 ADGDLTVTVSVTEDFTGAIADSINYSVDQLRDLVATINHSAVQVAAAVQDTQNTARQLAK 427

Query: 424 ASEHQAQEIAGASAAINEMAVSIDQVSANAAESSAVAERSVAIANKGNEVVHNTITGMDN 483
           ASEHQA +I+ AS A+ +M  SID+VSA+A ES+ VAERSVAIANKGNEVVHNTI GMDN
Sbjct: 428 ASEHQAAQISEASEAVGDMVESIDRVSAHAYESAKVAERSVAIANKGNEVVHNTINGMDN 487

Query: 484 IREQIQDTSKRIKRLGESSQEIGDIVSLINDIADQTNILALNAAIQASMAGDAGRGFAVV 543
           IREQIQDT+KRIKRLGESSQEIGDIVSLI+DIADQTNILALNAAIQAS+AG+AGRGFAVV
Sbjct: 488 IREQIQDTAKRIKRLGESSQEIGDIVSLIDDIADQTNILALNAAIQASLAGEAGRGFAVV 547

Query: 544 ADEVQRLAERSSAATKQIEALVKTIQTDTNEAVISMEQTTSEVVRGARLAQDAGVALEEI 603
           ADEVQRLAERSS+AT+QIEALV+TIQ DTNEAVISMEQTT+EVVRGARLAQDAGVAL EI
Sbjct: 548 ADEVQRLAERSSSATRQIEALVRTIQADTNEAVISMEQTTAEVVRGARLAQDAGVALAEI 607

Query: 604 EKVSKTLAALIQNISNAARQQASSAGHISNTMNVIQEITSQTSSGTTATAKSIGNLAKMA 663
           E VS+ LA LI +IS+AA+ Q SSAG IS+TM VIQ+IT+QTS+G+ ATA SI +LA+MA
Sbjct: 608 EGVSQNLADLIHSISDAAQLQTSSAGQISHTMAVIQQITAQTSAGSGATADSIRHLARMA 667

Query: 664 NEMRHSVSGFTLP 676
           +EMR SVSGFTLP
Sbjct: 668 SEMRRSVSGFTLP 680