Pairwise Alignments

Query, 834 a.a., periplasmic nitrate reductase, large subunit from Pseudomonas stutzeri RCH2

Subject, 960 a.a., putative Formate dehydrogenase, alpha subunit from Pseudomonas putida KT2440

 Score =  175 bits (443), Expect = 1e-47
 Identities = 135/505 (26%), Positives = 226/505 (44%), Gaps = 56/505 (11%)

Query: 48  CRFCGTGCGVMVATREGRVVATHGDVKAEVNRGINCVKGYFLSKIMYGSDRLTQPLLRMK 107
           C +CG GC      +  ++V    D     N G  CVKG F        DR+T+P++R +
Sbjct: 250 CAYCGVGCSFRAEIKGDQLVRMVPDKNGGANHGHACVKGRFAWGYATHPDRITKPMIRKR 309

Query: 108 DGKFDKQGEFQPITWDQAFDIMEEKYKAALKQGGPEAIGMFGSGQWTIWEGYAANKLMKA 167
                 +  +Q ++WD+A      +++    + G ++IG   S + T  E Y   KL++ 
Sbjct: 310 -----LEDPWQEVSWDEAVTYAASEFRRIQLKYGRDSIGGITSSRCTNEEAYLVQKLVRT 364

Query: 168 GFRSNNIDPNARHCMASAAFGFMRTFGMDEPMGCYEDIEAADAFVLWGSNMAEMHPVLWT 227
            F +NN+D  AR C +   +G  +T G       ++ +  AD  ++ G+N  + HPV  +
Sbjct: 365 AFGNNNVDTCARVCHSPTGYGLKQTLGESAGTQSFDSVMQADVVLVIGANPTDAHPVFGS 424

Query: 228 RVTDRRLSAPNVKVAVMSTFEHRSFELADIP-------MIFNPQTDLVILNYIANHIIQS 280
           ++  RRL     + A +   + R  +L D P       +   P T++ +LN +A+ I+  
Sbjct: 425 QLK-RRLR----QGARLIVIDPRRIDLVDSPHARADLHLQLRPGTNVAMLNALAHVIVTE 479

Query: 281 GAVNKDFIEKHTKFAKGATNIGYGLRPTDPLELKAENAAVANTWSD-ISFEDYAEFLKTY 339
           G + + FI+   +    A                         W D +S  D A      
Sbjct: 480 GLLAQSFIDARCETGDFAR------------------------WRDFVSLPDNAP----- 510

Query: 340 TLEYAAKESGVPAERLQALAELYADPKVKVMSFWTMGFNQHTRGVWANNMIYNIHLLTGK 399
             E      GVPAE+++A A LYA      + ++ +G  +H++G  A   I N+ + TG 
Sbjct: 511 --EVLGPVCGVPAEQIRAAARLYATGGNAAI-YYGLGVTEHSQGSTAVMGIANLAMATGN 567

Query: 400 ISEPGNSPFSLTGQPSACGTAREVGTFSHRLPADMAVANPKHRAIAEKIWKLPEGTIQEK 459
           I   G     L GQ +  G+  ++G+F H LP    V+N   RA  E+ W +   T+Q  
Sbjct: 568 IGREGVGVNPLRGQNNVQGSC-DMGSFPHELPGYRHVSNEGVRAEFEQAWGV---TLQPD 623

Query: 460 PGFHAVEQSRKLKDGVLKVYWTQVTNNMQAGPNVMQEILPGWRNPETFIIVSDVYPTVSA 519
           PG           DG  K  + Q  +  Q+ PN  Q +       E  ++V D++   +A
Sbjct: 624 PGLRIPNMFEAALDGSFKALYCQGEDIAQSDPNT-QHVTAALLAMEC-VVVQDIFLNETA 681

Query: 520 QAADLILPSAMWVEKEGAYGNAERR 544
           + A + LP + ++EK+G + NAERR
Sbjct: 682 KFAHVFLPGSSFLEKDGTFTNAERR 706



 Score = 53.5 bits (127), Expect = 6e-11
 Identities = 40/130 (30%), Positives = 61/130 (46%), Gaps = 4/130 (3%)

Query: 700 FALPYDVPA-EVPDKDYPFWLSTGRVLEHWHTGSMTQRVDELHQAVPDALVYMHPEDARK 758
           F L   VP  E  +  YP  L+TGR+L  ++ G+ T+R   +     D L  +HP DA  
Sbjct: 797 FMLTGYVPTDEKVNNRYPLLLTTGRILSQYNVGAQTRRTGNVAWHDADRL-EIHPTDAES 855

Query: 759 LNARRGSVVKVISRRGEMQARIETRGRNKPPMGLVFVPFFDANKLINKVTLDATDPISKQ 818
              + G  V + SR G+   R +   R  P  G+V+  F       N +T D +D  +  
Sbjct: 856 RGIQDGDWVGIGSRAGQTVLRAKVSTRVAP--GVVYTTFHFPESGANVITTDNSDWATNC 913

Query: 819 TDYKKCAVKI 828
            +YK  AV++
Sbjct: 914 PEYKVTAVEV 923