Pairwise Alignments

Query, 834 a.a., periplasmic nitrate reductase, large subunit from Pseudomonas stutzeri RCH2

Subject, 1341 a.a., assimilatory nitrate reductase/sulfite reductase from Pseudomonas putida KT2440

 Score =  335 bits (859), Expect = 1e-95
 Identities = 246/814 (30%), Positives = 366/814 (44%), Gaps = 129/814 (15%)

Query: 45  KAPCRFCGTGCGVMVATREGRVVATHGDVKAEVNRGINCVKGYFLSKIMYGSDRLTQPLL 104
           ++ C +CG GCG++++  +G+V    GD     N G  C KG    + +  S R+    L
Sbjct: 7   RSVCPYCGVGCGIVMSVADGKVGKISGDKLHPSNFGRLCTKGLTAHQPLSASGRMADAYL 66

Query: 105 RMKDGKFDKQGEFQP---ITWDQAFDIMEEKYKAALKQGGPEAIGMFGSGQWTIWEGYAA 161
           R        Q   QP    + DQA     E+ +  + Q GP+A+ ++ SGQ ++   Y A
Sbjct: 67  R--------QQRSQPPVRTSMDQAIAATAERLRGIIDQHGPDAVALYVSGQMSLEAQYLA 118

Query: 162 NKLMKAGFRSNNIDPNARHCMASAAFGFMRTFGMDEPMGCYEDIEAADAFVLWGSNMAEM 221
           NKL K   R+ +I+ N+R CMASA+ G+  + G D P G Y+D E AD F++ G+NMA+ 
Sbjct: 119 NKLAKGFIRTRHIESNSRLCMASASSGYKLSLGADGPPGSYQDFEHADVFLVIGANMADC 178

Query: 222 HPVLWTRVTDRRLSAPNVKVAVMSTFEHRSFELADIPMIFNPQTDLVILNYIANHIIQSG 281
           HP+L+ R+ DR  +    K+ V+      + + AD+ +   P +D+ +LN + + + ++G
Sbjct: 179 HPILFLRLLDRVKAG--AKLIVVDPRRSATADKADLFLQVRPGSDMALLNGLLHLLHRNG 236

Query: 282 AVNKDFIEKHTKFAKGATNIGYGLRPTDPLELKAENAAVANTWSDISFEDYAEFLKTYTL 341
             N DFI +HT+                                   +++   FL  YT 
Sbjct: 237 HTNPDFIARHTE----------------------------------GWDEMPAFLDDYTP 262

Query: 342 EYAAKESGVPAERLQALAELYADPKVKVMSFWTMGFNQHTRGVWANNMIYNIHLLTGKIS 401
           E  A  +G+    +   AE         MS WTMG NQ   G W +N I N+HL TG I 
Sbjct: 263 ERVAAITGLAEADIIKAAEWIGSAN-NWMSCWTMGLNQSIHGTWHSNAICNLHLATGAIC 321

Query: 402 EPGNSPFSLTGQPSACGTAREVGTFSHRLPADMAVANPKHRAIAEKIWKLPEGTIQEKPG 461
            PG+ PFSLTGQP+A G  R++G     LP   +      RA  E+ W+LP G+++ + G
Sbjct: 322 RPGSGPFSLTGQPNAMG-GRDMGYMGPGLPGQRSALVEDDRAFVERQWQLPPGSLRSEGG 380

Query: 462 FHAVEQSRKLKDGVLKVYWTQVTNNMQAGPNVMQEILPGWRNPETFIIVSDVYPTVSAQA 521
              V    ++K G +K  W   +N + +  N  Q+++ G R  E  I       T + + 
Sbjct: 381 EGTVALFGQMKAGEVKACWVICSNPVASVAN-RQQVIDGLRKAELVITQDAFLDTETNRY 439

Query: 522 ADLILPSAMWVEKEGAYGNAERRTQFWHQLVTAPGEARSDLWQLVEFSKRFNVDEVWPAE 581
           AD++LP+A+W E EG   N+ER      + V  PG++  D WQ++               
Sbjct: 440 ADILLPAALWAEGEGVMINSERNLTLMPRAVEPPGQSLPD-WQIIA-------------- 484

Query: 582 LLSKAPELKGKTLYDVLFKNGQVDKFPSDEITKGYANQEAEAFGFYLQKGLFEEYAEFGR 641
                          V    G  D F        Y N EA              Y E  R
Sbjct: 485 --------------RVACAMGYADAF-------DYPNAEA-------------VYEEIRR 510

Query: 642 GHAHDLASFETYHETRGLRWPVVDGKETQWRYREGYDP------YVEAGSEVQF------ 689
            H     +  T ++ RG+ +  +  +  QW    G +       Y+  GS          
Sbjct: 511 FH-----NPSTGYDLRGIGYAELRTQPRQWPCAPGSEQHRSPLRYLNDGSSQALLLDARG 565

Query: 690 ------YGYGDKKAIIFALPYDVPAEVPDKDYPFWLSTGRVLEHWHTGSMTQRVDELHQA 743
                 +     KA  FA P+   AEVPD DYP  L+TGRV   WHT + T +V  L++ 
Sbjct: 566 RRPALAFPTASGKAHFFARPWLPAAEVPDDDYPMVLNTGRVQHQWHTLTKTGKVPALNKL 625

Query: 744 VPDALVYMHPEDARKLNARRGSVVKVISRRGEMQARIETRGRNKPPMGLVFVPF-----F 798
            P   + +HPEDA +L       V V SRRG  QA +  R  ++   G  F PF      
Sbjct: 626 EPGPYLEIHPEDAARLGVAEKDQVAVRSRRG--QAVLPARISDRVMPGNCFAPFHWNDLI 683

Query: 799 DANKLINKVTLDATDPISKQTDYKKCAVKIEVVS 832
                IN  T DA DP+S Q  +K CAV +E V+
Sbjct: 684 GEQLAINAATCDAVDPLSLQPAFKHCAVALERVA 717