Pairwise Alignments

Query, 546 a.a., Cytochrome bd-type quinol oxidase, subunit 1 from Pseudomonas stutzeri RCH2

Subject, 514 a.a., cytochrome bd-II oxidase subunit 1 from Escherichia coli ECRC101

 Score =  603 bits (1556), Expect = e-177
 Identities = 285/503 (56%), Positives = 378/503 (75%)

Query: 6   VVDLSRLQFAMTAMYHFLFVPLTLGLAFLLAIMESVYVMTGKQVYKDMTQFWGKLFGINF 65
           V+DLSR QFA+TA+YHFLFVPLTLGL FLLAIME++YV+TGK +Y+DMT+FWGKLFGINF
Sbjct: 4   VIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGINF 63

Query: 66  ALGVTTGLTMEFQFGTNWAYYSHYVGDIFGAPLAIEGLMAFFLESTFIGLFFFGWDRLSK 125
           ALGV TGLTMEFQFGTNW++YS+YVGDIFGAPLA+E LMAFFLESTF+GLFFFGW RL+K
Sbjct: 64  ALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLNK 123

Query: 126 VQHLAVTWLVALGSNLSALWILIANGWMQNPVGSEFNFETMRMELVDFGALLFNPVAQVK 185
            QHL VTWLVA GSNLSALWIL ANGWMQ P G+ F+ +T+RME+  F  L+FNPV+QVK
Sbjct: 124 YQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQVK 183

Query: 186 FVHTVSAGYVTGAIFVLAISSFYLLKKRDLGFARRSFAIAAVFGLASTISVIILGDESGY 245
           FVHTV AGYVTGA+F++AIS++YLL+ R+   A RSFAI +VFG  + I  + LGD S Y
Sbjct: 184 FVHTVMAGYVTGAMFIMAISAWYLLRGRERDVALRSFAIGSVFGTLAIIGTLQLGDSSAY 243

Query: 246 EIGDVQKVKLAAIEAEWDTHPAPAGFTLFGLPNQQEMRTDYEVKIPYALGLIATRSVDEE 305
           E+  VQ VKLAA+E EW T PAPA F +   P Q + R  + +KIP  LG++AT S+D+ 
Sbjct: 244 EVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFAIKIPVLLGILATHSLDKP 303

Query: 306 IKGIKQLVAEHELRIRNGMLAYERLQVLRSGDKSAEAIAAFNEVKHDLGYGLLLKKYTAD 365
           + G+K L+AE   R++ G +A+  +Q +  G++    + AF E++ DLGYG+LL +Y  D
Sbjct: 304 VPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRELEGDLGYGMLLSRYAPD 363

Query: 366 VVDASEEQIKLAALDTIPNVFSLFWTFRVMVAAGFLMLLLFALASWASIKRDAESKPWLL 425
           +   +  Q + A    IP V  +FW+FR+MV  G L+LL+  +A   +++   +   W+L
Sbjct: 364 MNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQHRWVL 423

Query: 426 RFALFSLPLPWIAAQTGWYVAEHGRQPWSIAEVLPTHLSTSTLAAGDIWGSLIALVAFYS 485
           + AL+SLPLPWIA + GW++ E GRQPW+I ++LPT+ + S L  G +  SLI +V  Y+
Sbjct: 424 KMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSLIMIVGLYT 483

Query: 486 LLLVIEMFLMIRFARLGPSSLHT 508
           L L+ E++LM ++ARLGPS++ +
Sbjct: 484 LFLIAEVYLMQKYARLGPSAMQS 506