Pairwise Alignments

Query, 380 a.a., cytochrome d oxidase, subunit II (cydB) from Pseudomonas stutzeri RCH2

Subject, 335 a.a., Ubiquinol oxidase subunit II, cyanide insensitive from Pseudomonas putida KT2440

 Score =  171 bits (433), Expect = 3e-47
 Identities = 110/364 (30%), Positives = 172/364 (47%), Gaps = 37/364 (10%)

Query: 7   LKLVWWVLIGVLLIGFALTDGFDMGAMALMPFVGKTDNERRVAINTIAPHWDGNQVWFIT 66
           L L+W V+I   ++ + + DGFD+G   L PFV K + +R V +NT+AP WDGN+ W + 
Sbjct: 5   LPLIWAVIIIFGVMMYVVMDGFDLGIGMLFPFV-KGEQDRDVMMNTVAPVWDGNETWLVL 63

Query: 67  AGGALFAAWPMVYAVAFSGLYWAMLLVLFALFCRPVGFDYRSKVEDPRWRSAWDWALFVG 126
            G  LF A+PM YAV    LY  ++L+L  L  R V F++R K +  + R  WD A   G
Sbjct: 64  GGAGLFGAFPMAYAVVLEALYLPLILMLIGLIFRGVAFEFRFKAKADK-RHIWDKAFIWG 122

Query: 127 GAVPALVFGVAFGNLFLGLPFQLDELMRSTYQGSFFALLNPFALLCGIVSLSMLSAHGGA 186
             +     GVA G    G      +++   + G     L PF+L CG+  +   +  G  
Sbjct: 123 SLIATFFQGVALGAFLEGF-----KVVDRHFAGGTLDWLTPFSLFCGLGLIVAYTLLGCT 177

Query: 187 WLMLRTDGALAERSRQATRLCALVFLVGFLAAGLWLMLGVQGFTQLSVTDPGAALNPLLD 246
           WL+++T+G L ++     R  ALV LV      LW  +               A   + D
Sbjct: 178 WLIMKTEGPLQQKMHDMARPLALVLLVVIGIVSLWTPI---------------AYPQIAD 222

Query: 247 KQVVQDNAGWLGNYGRYPITLIAPVAGILGALLALLGSSRNSGGASFVGTSLMIVGSICT 306
           +     N  W   +   P+ ++    G+L A+      +RN+    F+ T ++I      
Sbjct: 223 RWFSMPNLIW---FMPVPLLVLVTFYGLLKAV------ARNAHYTPFLLTLVLIFLGYSG 273

Query: 307 AGFALFPFVFPSSLDPASSLTIWDAVSSKKTLGIMFVVACIFVPLILCYTLWSYVRMWGR 366
            G +L+P + P       S++IWDA +  ++ G M V     +P IL YT WSY    G+
Sbjct: 274 LGISLWPNIIP------PSISIWDAAAPPQSQGFMLVGTLFILPFILMYTFWSYYVFRGK 327

Query: 367 LNQK 370
           +  +
Sbjct: 328 VTHE 331