Pairwise Alignments

Query, 528 a.a., fagellar hook-basal body proteins from Pseudomonas stutzeri RCH2

Subject, 407 a.a., flagellar hook protein FlgE from Rhodanobacter sp. FW510-T8

 Score =  182 bits (463), Expect = 2e-50
 Identities = 114/302 (37%), Positives = 164/302 (54%), Gaps = 51/302 (16%)

Query: 235 NAAKALPANQAAALTAANGT-----FNPAD-PTTYNSSTSLNIYDSQGNAHVMTQYFVKT 288
           NAAKA    Q +    +N T     F+P + P +YN +T    YDS G  H    YFVK 
Sbjct: 148 NAAKATDLVQMSLNLPSNATPPAAAFDPLNNPLSYNQATPFTAYDSLGATHSGVVYFVKD 207

Query: 289 -SANTWDMKVLIDGRNPASPAQEPPQPYVMGLTFDASGALTAIDNGGSGLFSVSPDRKVT 347
            +AN W+  + +DG +  +  +         LTF++SGAL A                  
Sbjct: 208 PAANVWNASLYVDGTSTGASQR---------LTFNSSGALVA------------------ 240

Query: 348 LNSATGNPPSGGWIPAISNGATPATWSANGALANPGGIVLDFSKSTQYASAFAVNSVAQD 407
                         PA    + PA   + GA  NP  + LD SK+TQ+ + +A +++  +
Sbjct: 241 --------------PASGRLSFPAVSVSPGA--NPMQLTLDMSKATQFGNTYAASAINPN 284

Query: 408 GYTTGELAGLEIDDTGVIFARYTNGQSKVQGQIILANFANVQGLTPVGKTQWVQSFESGE 467
           GY TG L+ +++   GV+ A+Y+NGQ+   GQ+ LA F+N QGL  +  T W  S++SG 
Sbjct: 285 GYPTGILSSIDVSREGVVQAKYSNGQTASLGQLALAQFSNEQGLRQLDNTNWAASYDSGT 344

Query: 468 PVVGTPGSGTLGALQAGALEDSN-VELSDQLVNLIVAQRNYQANAKTIETESAITQTIIN 526
           PV+G  G GT G +QAGALE SN  +L+ QLVN+I AQRNYQANA+ I  ++ +TQT+IN
Sbjct: 345 PVMGAAGGGTFGNVQAGALEASNSADLTAQLVNMIKAQRNYQANAQVISVDNQLTQTVIN 404

Query: 527 LR 528
           +R
Sbjct: 405 IR 406



 Score =  156 bits (394), Expect = 2e-42
 Identities = 96/250 (38%), Positives = 137/250 (54%), Gaps = 10/250 (4%)

Query: 1   MSFNIGLSGLRAASKDLNVTGNNIANAGTVGFKQSRAEFSDVYAASVLGTGKNPQGSGVL 60
           M FNI LSGL AASKDL VT NNIAN  T GFK SR +F++++ A+      +  GSGV 
Sbjct: 1   MPFNIALSGLNAASKDLEVTANNIANTATTGFKGSRTQFAELFNAAGPNLSSSQTGSGVR 60

Query: 61  MSNISQQFNQGNINYTQNALDLAINGNGFFQISNNGAVSYTRAGYFGTDRSGFLVDNFGY 120
           ++N++QQF  G+I  T N+LD AI+G GFF + +    SYTRAG F  D++G++++  G 
Sbjct: 61  LTNVAQQFTAGSIETTNNSLDFAISGGGFFTLHDGKGYSYTRAGAFQKDQNGYVMNANGQ 120

Query: 121 KLQGFPVDGNGNLQNGVIGDLQIQTTNQAPKATSQINTAFNLNSTQKSPVTWQSAYDASL 180
           +LQ +P    G   N  + DLQ+ T+  A KAT  +  + NL S    P    +A+D   
Sbjct: 121 RLQVYPPVAGGGFDNSTLTDLQLVTSQNAAKATDLVQMSLNLPSNATPPA---AAFDPLN 177

Query: 181 QPAYDAAYNTSLTTAGQAAYDAEFAVSGDPALAEDARAAALVNATNITNAQAAGNAAKAL 240
            P    +YN +       AYD+  A            AA + NA+   +  + G A++ L
Sbjct: 178 NP---LSYNQATPF---TAYDSLGATHSGVVYFVKDPAANVWNASLYVDGTSTG-ASQRL 230

Query: 241 PANQAAALTA 250
             N + AL A
Sbjct: 231 TFNSSGALVA 240