Pairwise Alignments

Query, 528 a.a., fagellar hook-basal body proteins from Pseudomonas stutzeri RCH2

Subject, 440 a.a., Flagellar hook protein FlgE from Pseudomonas putida KT2440

 Score =  263 bits (671), Expect = 1e-74
 Identities = 178/461 (38%), Positives = 242/461 (52%), Gaps = 53/461 (11%)

Query: 82  LAINGNGFFQISNNGAVSYTRAGYFGTDRSGFLVDNFGYKLQGFP----VDGNGNLQNGV 137
           L + GN    ++  G         F + R+ F  D +   ++G      V G G ++   
Sbjct: 17  LNVTGNNIANVATTG---------FKSSRAEF-ADQYSNSIRGTSAGKTVIGTG-VKTAA 65

Query: 138 IGDL----QIQTTNQAPKATSQINTAFNLNSTQKSPVTWQSAYDASLQPAYDAAYNTSLT 193
           +  L     I  T QA       N  F LN       T   A+ +       A Y  + +
Sbjct: 66  VSQLFTPGNINATGQALDMAIDGNGFFALNDNGSKIYTRAGAFYSD-----KAGYVVNAS 120

Query: 194 TAGQAAYDAEFAVSGDPALAEDARAAALVNATNITNAQAAGNAAKALPANQAAALTAANG 253
            A    Y    AV  D  + +       ++ +N+T    +    K    N  +A T+ + 
Sbjct: 121 GANLQGY----AVGEDGKIIQGILTDLQIDTSNLTPKPTSLITEKI---NLNSAATSPSV 173

Query: 254 T-FNPADPTTYNSSTSLNIYDSQGNAHVMTQYFVKTSA-NTWDMKVLIDGRNPASPAQEP 311
           T F+P + ++YN + +  ++DSQGN H M QYF+K  A NTW M   IDGRNPA+PA   
Sbjct: 174 TPFDPTNASSYNFTFNTPVFDSQGNEHQMNQYFIKDDATNTWSMHTTIDGRNPANPASTT 233

Query: 312 PQPYVMGLTFDASG-----ALTAIDNGGSGLFSVSPDRKVTLNSATGNPPSGGWIPAISN 366
           P   V  + F + G     A+TA D  G    S+  D+   LN          WIPA  N
Sbjct: 234 P--LVNAVPFKSDGTLDKDAMTAGDVAGG--LSIGEDKIFQLND---------WIPAQKN 280

Query: 367 GATPATWSANGALANPGGIVLDFSKSTQYASAFAVNSVAQDGYTTGELAGLEIDDTGVIF 426
            A    WSANGA+AN  G+ LD   +TQY ++ A  +  QDG+ TGEL+GL ID  G +F
Sbjct: 281 AA--GEWSANGAIANADGVKLDMLGATQYNASSAEIAKTQDGFATGELSGLSIDQNGYLF 338

Query: 427 ARYTNGQSKVQGQIILANFANVQGLTPVGKTQWVQSFESGEPVVGTPGSGTLGALQAGAL 486
           A +TNG+ KV GQ+ +ANFAN+QGLTP+G T W +S+ SG PV+G P +GTLG +  GAL
Sbjct: 339 ASFTNGKDKVIGQVAIANFANLQGLTPIGGTNWKESYASGVPVIGAPDTGTLGQISGGAL 398

Query: 487 EDSNVELSDQLVNLIVAQRNYQANAKTIETESAITQTIINL 527
           EDSNV+L+ +LVNLI AQ NYQANAKTI TES I QTII +
Sbjct: 399 EDSNVDLTGELVNLIKAQSNYQANAKTISTESTIMQTIIQM 439



 Score =  184 bits (468), Expect = 4e-51
 Identities = 99/192 (51%), Positives = 130/192 (67%), Gaps = 4/192 (2%)

Query: 1   MSFNIGLSGLRAASKDLNVTGNNIANAGTVGFKQSRAEFSDVYAASVLGT--GKNPQGSG 58
           MSFNIGLSGL AA+K LNVTGNNIAN  T GFK SRAEF+D Y+ S+ GT  GK   G+G
Sbjct: 1   MSFNIGLSGLYAANKALNVTGNNIANVATTGFKSSRAEFADQYSNSIRGTSAGKTVIGTG 60

Query: 59  VLMSNISQQFNQGNINYTQNALDLAINGNGFFQISNNGAVSYTRAGYFGTDRSGFLVDNF 118
           V  + +SQ F  GNIN T  ALD+AI+GNGFF +++NG+  YTRAG F +D++G++V+  
Sbjct: 61  VKTAAVSQLFTPGNINATGQALDMAIDGNGFFALNDNGSKIYTRAGAFYSDKAGYVVNAS 120

Query: 119 GYKLQGFPVDGNGNLQNGVIGDLQIQTTNQAPKATSQINTAFNLNSTQKSPVTWQSAYDA 178
           G  LQG+ V  +G +  G++ DLQI T+N  PK TS I    NLNS   SP    + +D 
Sbjct: 121 GANLQGYAVGEDGKIIQGILTDLQIDTSNLTPKPTSLITEKINLNSAATSPSV--TPFDP 178

Query: 179 SLQPAYDAAYNT 190
           +   +Y+  +NT
Sbjct: 179 TNASSYNFTFNT 190