Pairwise Alignments

Query, 528 a.a., fagellar hook-basal body proteins from Pseudomonas stutzeri RCH2

Subject, 261 a.a., flagellar basal-body rod protein FlgG from Pseudomonas putida KT2440

 Score = 85.1 bits (209), Expect = 3e-21
 Identities = 62/174 (35%), Positives = 86/174 (49%), Gaps = 15/174 (8%)

Query: 5   IGLSGLRAASKDLNVTGNNIANAGTVGFKQSRAEFSD-VYAASVLGTGKNPQ-------- 55
           +  +GL A   +L V  NN+AN  T GFK+ RAEF+D +Y        ++ Q        
Sbjct: 7   VAKTGLSAQDTNLTVISNNLANVSTTGFKRDRAEFADLLYQIKRQPGAQSTQDSELPSGL 66

Query: 56  --GSGVLMSNISQQFNQGNINYTQNALDLAINGNGFFQI-SNNGAVSYTRAGYFGTDRSG 112
             G+GV +    + F  G++  T N LD+A+NG GFFQI   +G VSYTR G F  +  G
Sbjct: 67  QVGTGVRIVGTQKSFVAGSLQTTDNPLDMAVNGRGFFQILQPDGTVSYTRDGTFHLNSDG 126

Query: 113 FLVDNFGYKLQGFPVDGNG--NLQNGVIGDLQIQTT-NQAPKATSQINTAFNLN 163
            +V + GY L+   V  N       G  G + I T  N A +    I TA  +N
Sbjct: 127 QIVTDNGYALEPAIVVPNDAQTFTVGQDGTVSITTAGNPAAQVIGNIQTADFIN 180



 Score = 68.2 bits (165), Expect = 3e-16
 Identities = 50/151 (33%), Positives = 72/151 (47%), Gaps = 10/151 (6%)

Query: 366 NGATPATWSANGALANPGGIVLDFSKSTQYASAFAVNSVAQDGYTTGELAGLEIDDTGVI 425
           +G    T      L + G IV D   + +   A  V + AQ  +T G+   + I   G  
Sbjct: 109 DGTVSYTRDGTFHLNSDGQIVTDNGYALE--PAIVVPNDAQT-FTVGQDGTVSITTAG-- 163

Query: 426 FARYTNGQSKVQGQIILANFANVQGLTPVGKTQWVQSFESGEPVVGTPGSGTLGALQAGA 485
                N  ++V G I  A+F N  GL  +G   ++++  SG P VGTPG    G      
Sbjct: 164 -----NPAAQVIGNIQTADFINPAGLQAIGDNLFLETAASGAPQVGTPGLNGFGTTLQQT 218

Query: 486 LEDSNVELSDQLVNLIVAQRNYQANAKTIET 516
           LE+SNV   ++LVN+I  QR Y+ N+K I T
Sbjct: 219 LENSNVSTVEELVNMITTQRAYEMNSKVIST 249