Pairwise Alignments

Query, 104 a.a., competence protein ComEA helix-hairpin-helix repeat region from Pseudomonas stutzeri RCH2

Subject, 772 a.a., RNA-binding transcriptional accessory protein from Erwinia tracheiphila SCR3

 Score = 41.6 bits (96), Expect = 2e-08
 Identities = 29/86 (33%), Positives = 42/86 (48%), Gaps = 5/86 (5%)

Query: 22  HAATQSQPAPAPVAAVTQA----SVNLNTADAATLTRELKGIGATKAKAIVDYREEHGPF 77
           H  +QSQ A    A V        V+LNTA    LTR + G+    A+ IV +R+EHG F
Sbjct: 472 HDVSQSQLAKKLDAVVEDCVNGVGVDLNTASVPLLTR-VAGLSKMIAQNIVSWRDEHGRF 530

Query: 78  SSVDELLEVKGIGSATLQKIRSQLSV 103
               +LL+V  +G    ++    L +
Sbjct: 531 QDRQQLLKVSRLGPKAFEQCAGFLRI 556