Pairwise Alignments

Query, 381 a.a., pilus retraction protein PilT from Pseudomonas stutzeri RCH2

Subject, 401 a.a., Twitching motility protein PilT from Pseudomonas sp. S08-1

 Score =  395 bits (1015), Expect = e-114
 Identities = 199/351 (56%), Positives = 260/351 (74%), Gaps = 1/351 (0%)

Query: 1   MEFEKLLRLMVEKGGSDLFITAGVPPSMKVNGKIMPVSKTAMSPEMTRETVHGVMNEQQR 60
           M+  ++L+++  + GSDL+++ G PP  K NG + P+S+  + P        GVM+E QR
Sbjct: 1   MDLTQMLKILSSQDGSDLYLSTGAPPCAKFNGVLKPLSQEPLKPGDVAAIAAGVMDELQR 60

Query: 61  REFTENHECNFAISARGIGRFRVSAFYQRNLAGMVLRRIETNIPTIEELKLPDVLKKLSM 120
            +F +  E N AIS   +GRFR++ F QRN   +V R I+  IP  E+LKLP+VL K  M
Sbjct: 61  ADFEKELEMNLAISVPNVGRFRINIFKQRNEVSIVARNIKMEIPKFEDLKLPEVLLKTVM 120

Query: 121 TKRGLVLFVGATGTGKSTSLASMIGYRNKNSSGHIISIEDPIEFIHQHQSCIVTQREVGI 180
            KRGLVLFVG TG+GKSTSLA++I YRN+NS GHII+IEDP+E++H+H+  I+ QREVG+
Sbjct: 121 EKRGLVLFVGGTGSGKSTSLAALIDYRNRNSGGHIITIEDPVEYVHRHKKSIINQREVGV 180

Query: 181 DTSSFEVALKNTLRQAPDVILIGEIRTRETMDYAVAFAETGHLCLATLHANNANQALDRI 240
           DT SF  ALKNTLRQAPDVILIGEIR RETM++A+AFA+TGHL ++TLHANNANQALDRI
Sbjct: 181 DTRSFHAALKNTLRQAPDVILIGEIRDRETMEHALAFADTGHLAISTLHANNANQALDRI 240

Query: 241 INFFPPDRHNQVWMDLSLNLKAIVAQQLVPTPDGKGRRAVIEVLINTPLAADLIRKGEVH 300
           INFFP +R  Q+  DL  NLKA V+Q+LV T DGK RRA +EVL+ TP   D I++G+  
Sbjct: 241 INFFPEERRPQLLNDLGNNLKAFVSQRLVKTVDGK-RRAAVEVLLGTPTIRDQIKRGDFS 299

Query: 301 ELKSLMKRSTELGMQTFDQALYNLYVQGEITYEDALLHADSANDLRLLIKL 351
           E+K  M++S  LGMQTFDQAL +L   G I  E+A+ +ADSAN++RL +KL
Sbjct: 300 EIKETMEKSKNLGMQTFDQALIDLVHDGSIDEEEAVKNADSANNVRLKLKL 350