Pairwise Alignments

Query, 492 a.a., Arabinose efflux permease from Pseudomonas stutzeri RCH2

Subject, 459 a.a., MFS transporter permease from Pseudomonas simiae WCS417

 Score =  233 bits (593), Expect = 1e-65
 Identities = 141/417 (33%), Positives = 219/417 (52%), Gaps = 1/417 (0%)

Query: 3   SSLRWLVLGILSSALLLIVIDMTVIYLALPSLTYELRASATEKLWIVNAYALTVAGLLPG 62
           SS + L L       +++++D++V+ +AL S   E      +  WIVNAY L  A  L  
Sbjct: 4   SSKKKLTLFATCLGFVVVLLDVSVVNVALESFKAEFATDVLQLQWIVNAYTLLFASFLLT 63

Query: 63  MGALGDRFGHKRMFISGLVVFGWASLGAAFSPTPEILIAARVALAVGAAMMMPATLAIIR 122
            GALGDRFGHK++F+ G VVF  ASLG   + T   LI  R    +GAA+++P +LA++R
Sbjct: 64  GGALGDRFGHKKVFLWGYVVFTLASLGCGLAQTLPSLIGFRALQGIGAALLVPTSLALVR 123

Query: 123 HVFEDTRERALAFGIWAAIASGGAAFGPVVGGVLLEHFWWGSVFIINVPIVLLALVLAVI 182
             FE   ER+ A  +WA +A    A GPVVGG+L+  F W S+F IN+PI L+ +VL +I
Sbjct: 124 ITFEVPAERSKAIALWAGVAGIALAAGPVVGGLLIGVFGWRSIFFINLPIGLIGIVLCLI 183

Query: 183 WVPSRPGNPQRPFDLLASLWVMGALVGLTLAIKEAGKADPSLLQASVAACTAVVCALAFL 242
             P  P N +  FDL   L  +  L  LT  + E G+      +  + A   +   L FL
Sbjct: 184 NAPRIPANHKGGFDLWGQLLALFTLANLTYTVIELGRQKGLDQRVVMHALCFLGGLLGFL 243

Query: 243 RRQRQTAVPMIDFTLFRDRSFSAGVITASVASAALMGMELVVSQRLQLVVGLSPLQAGLT 302
             + +TA PM+   +F + +FS   I   + +    G+  V S  LQ V   S +  GL 
Sbjct: 244 WVESRTARPMVPLAVFNNAAFSLASILGVIVNFVFYGLIFVFSIFLQQVNHYSVINTGLA 303

Query: 303 ILPIPLGAFIVGPLAGLALPRIGAERILSTSLALSAAGALLYLLGYAGEQWLQI-LSFSL 361
            +P+    F    LA   LP++G  R+LS  LA++  G +       G  +  I +   +
Sbjct: 304 FIPMTGVLFFGNQLAARWLPKLGERRLLSLGLAIALLGVVALTPFVGGAPYAHIAVQMFV 363

Query: 362 LGFGVGAAMTAASSAMLLQAPADRAGMAASIEEVSYELGGALGIAILGSLMSAVYAA 418
           +GFG+   +   ++  +    +D++G+A++I   S ++GG +G+AI   L++   AA
Sbjct: 364 IGFGISLTVPTLTATAVNHVSSDKSGVASAIVNASRQVGGLIGVAIFSLLINVADAA 420