Pairwise Alignments

Query, 714 a.a., Rad3-related DNA helicases from Pseudomonas stutzeri RCH2

Subject, 679 a.a., DinG family ATP-dependent helicase YoaA from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  199 bits (505), Expect = 5e-55
 Identities = 214/706 (30%), Positives = 308/706 (43%), Gaps = 95/706 (13%)

Query: 23  LKARYGQRLMIAEVAKVLGTIKTDAEGRRESEPAVVAVEAGTGTGKTVAYSLAAIPTAKA 82
           L+ R GQ  M A VA+ +     +  G        +AVEAGTG GKT AY +  +     
Sbjct: 25  LRPRQGQLDMAAAVARAI----ENGHG--------LAVEAGTGVGKTFAYLVPLL----L 68

Query: 83  AGKRLVIATATVALQEQIVHKDLPDLMRNSGLNFSFALAKGRGRYLCLSKLDLLLQEGQA 142
           +G+R +++TAT ALQ+Q+  +D+P ++R  GL    AL KGR  Y+CL +L+  L  G A
Sbjct: 69  SGRRALLSTATQALQDQLFARDIPAVVRALGLPVRVALLKGRSSYVCLHRLEQALH-GPA 127

Query: 143 QSATAQLFEEEGFR--IEVDERSQKLFTSMIEKLAGNRWDGDRDSWPEELGDSDWSQLTT 200
            +         G    +    RS+    + +E L       D  S    L       +T+
Sbjct: 128 SAGPRDPAISAGLTQVLHWAHRSRSGDLAELEAL-------DERSPLRPL-------ITS 173

Query: 201 DHSQCTGRHCPNFQQCAFYKAREGMTKVDVIVTNHDMVLAD-LALGGGAVLPDPRETIYV 259
               C G  CP   +C   +AR    + + +V NH +  +D L L  G     P   + V
Sbjct: 174 TRDNCLGASCPRHGECHVNRARGEALQAEWVVINHHLFFSDQLLLETGVASLLPAADVVV 233

Query: 260 FDEGHHLPDKAIGHFAHFTRLRSTADWLGQVEKNLTKLLAQHPLPGELGRLVEGIPELAR 319
           FDE H L D  I                GQ+ + L + LA        G+       LA 
Sbjct: 234 FDEAHQLNDTGIPFLGRTLGA-------GQL-RELARDLATQGAQWARGQRPWAHLALAI 285

Query: 320 ELRTQQQFMFSACEQLADFKAGEDMEGRERPRHRFVGGVVPEHLVELGTELKKGFAKLTD 379
           E   Q     +A  + A    G         RHR+  G  PE +  L  +  +G A L  
Sbjct: 286 E---QASRAMAALPRQASASGG---------RHRW-HGAAPEGVDTLAWQ--RGIANL-- 328

Query: 380 LFTRIAELLKEDMDGETGSGIASHQAEEWYPLFGSLLTRSQGNWELWTAFTV-EDPEDSP 438
                 + L   +   T +  A+ + E        L  R Q    +W           + 
Sbjct: 329 -----GQALAAALAALTATAQAAAELER-------LRVRVQALQTVWDDMGFGPSAAQAS 376

Query: 439 PMARWLTLAEGG--ALFDIEVNASPI---LAAETLRRNLWNVAFGALVTSATLTALNSFD 493
            M RW+   EG    +     ++S +   L  E   R  W      + +SATL       
Sbjct: 377 EMVRWVEWGEGRHWRIVCAPPDSSRLFQSLLDEAPGRRSW------VFSSATLGDDAELS 430

Query: 494 RYRMRAGLPK-GAVTAVVPSPFHHADAGVLRVPDLKADPRDAAAHTAAIVRELPALVEGA 552
            +    GL   G  T  VPSPF HA    L VP    +P DA+ HT A+   +       
Sbjct: 431 WFTRGLGLDALGLQTLRVPSPFDHATQAALYVPHDLPEPADAS-HTPALADAVARWASRL 489

Query: 553 RG-TLVLFSSRK---QMQDVFDGLERDWR---RRVLIQGNLSKQETLNKHKARVDDGESS 605
            G TLVL ++ K   +M +   GL    R    RVL QG LSK+  L + +   +  E S
Sbjct: 490 GGRTLVLTTTLKAASRMAEHLQGLVAQGRCAPLRVLAQGRLSKRALLARFR---EGSEPS 546

Query: 606 VLFGLASFAEGVDLPGAYCEHVVIAKIPFAVPDDPVEAALAEWIGARGGNPFMEIAVPDA 665
           VL   ASF EGVDL G   + +VI K+PFA PDDP+  A  + + A+G + F +  +P+A
Sbjct: 547 VLVASASFWEGVDLAGDALQLLVIDKLPFAPPDDPLMQARGQRLEAQGLSAFNDAFLPEA 606

Query: 666 SLRLVQACGRLLRTETDRGTITLLDRRVVTQRYGKAILNALPPFRR 711
           ++ L Q  GRL+R ETD+G + + DRR++T+ YG  +L ALP  RR
Sbjct: 607 AMALKQGAGRLIRAETDQGILVIGDRRLITRSYGNRLLEALPAMRR 652