Pairwise Alignments

Query, 714 a.a., Rad3-related DNA helicases from Pseudomonas stutzeri RCH2

Subject, 777 a.a., ATP-dependent helicase DinG/Rad3 from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  395 bits (1016), Expect = e-114
 Identities = 270/742 (36%), Positives = 373/742 (50%), Gaps = 68/742 (9%)

Query: 20  AKGLKARYGQRLMIAEVAKVLGTIKTDAEGRRESEPAVVA-----VEAGTGTGKTVAYSL 74
           A G +AR GQR M A +A  L  +    +G   S+ A+ A     V+AGTG GK+ AY+ 
Sbjct: 41  APGYRARPGQREMAAHIAHTLSGVSL-GDGAVASDAALPARGIAVVQAGTGVGKSAAYAS 99

Query: 75  AAIPTAKAAGKRLVIATATVALQEQIVHKDLPDLMRNSGLNFSFALAKGRGRYLCLSKLD 134
             IP A A  KR++I+TATVALQEQ++ KDLP L  +    FSFALAKGRGRY+C  KLD
Sbjct: 100 TVIPLALAQQKRVIISTATVALQEQLIAKDLPALAASLPQPFSFALAKGRGRYVCRLKLD 159

Query: 135 LLLQEGQAQSATAQLFEEE----------GFRIEV----------DERSQKLFTSMIEKL 174
            L       +A+A LFE +          G   +            ER  + +T+  + L
Sbjct: 160 QL---SGGDAASADLFESDDGSASDTSAAGVAAQAVASAAAAARWQERGVQ-YTAWADAL 215

Query: 175 AGNRWDGDRDSWPEELGDSDWSQLTTDHSQCTGRHCPNFQQCAFYKAREGMTKVDVIVTN 234
               WDGDRD          W  +  +   CT RHCP++  C++Y+AR  + +  VIV N
Sbjct: 216 DDGSWDGDRDRLDTPPDGGLWGPVAAERHTCTARHCPSYNSCSYYQARARLAQAQVIVVN 275

Query: 235 HDMVLADLALGGGAVLPDPRETIYVFDEGHHLPDKAIGHFAHFTRLRSTADWLGQVEKNL 294
           HD++L+ L L     LP P++   VFDE HHL   A G F     L     WL ++ + +
Sbjct: 276 HDLLLSTLGLHA---LPAPQDCYLVFDEAHHLGSVAQGQFTASMDLMR-GHWLDKLPRAV 331

Query: 295 TKLLAQHPLPGELGRLVEGIPELARELRTQQ-QFMFSACEQLADFKAGEDMEGRERPRH- 352
            ++           R    +    +EL++ Q +    A +++    A  D+ GR   R  
Sbjct: 332 DEVATAID-----HRPTIDVAAFTKELKSAQTELARLAMQRIGSLPAWLDLTGRSAGRSP 386

Query: 353 -----------------RFVGGVVPEHLVELGTELKKGFAKLTDLFTRIAELLKEDMDGE 395
                            RF GGV+P   +E+  +L    + L  +F  +A  LK +    
Sbjct: 387 ARPGGGAFNEAGAPVVDRFEGGVLPAEWLEVVGKLHANASSLLKVFEALAAQLKANAREN 446

Query: 396 TGSGIASHQAEEWYPLFGSLLTRSQGNWELWTAFTVEDPEDSPPMARWLTLAEGGALFDI 455
            G      +  + Y   G L  R Q   E  + +     +  PP+A+WL       L  +
Sbjct: 447 PGDAA---RFAKLYSRLGVLAPRLQSAQETASYWQQVAGDGQPPLAKWLEAGVSHGLVTL 503

Query: 456 EVNASPILAAETLRRNLWNVAFGALVTSATLTALNSFDRYRMRAGLP-KGAVTA-VVPSP 513
             +A P+     LR +LWN    A+VTSA+LT   +FD +   +GL   GAV A  V SP
Sbjct: 504 TAHACPLQPGSLLRNHLWNQVRAAVVTSASLTTCGTFDHFLHESGLAWDGAVAAREVQSP 563

Query: 514 FHHADAGVLRVPDLKADPRDAAAHTAAIVRELPA-LVEGARGTLVLFSSRKQMQDVFDGL 572
           F HA  G L V    ADP+D   +T  ++  L A L E  RG LVLF+SR QM+     L
Sbjct: 564 FDHARQGRLVVVQTTADPKDVDGYTREMLALLMADLREVERGALVLFTSRAQMRQAQGLL 623

Query: 573 ERD----WRRRVLIQGNLSKQETLNKHKARVDDGESSVLFGLASFAEGVDLPGAYCEHVV 628
           ER      R RVL+QG  S+   L +H  RV +G+ SVLFGL SF EG+DLPG  CE V 
Sbjct: 624 ERGEHGALRDRVLVQGEASRTVLLRRHAERVAEGKPSVLFGLQSFGEGLDLPGELCEWVF 683

Query: 629 IAKIPFAVPDDPVEAALAEWIGARGGNPFMEIAVPDASLRLVQACGRLLRTETDRGTITL 688
           I K+PFA P DPV  A A+W+ ++G +PF E+ VP    RL+Q  GR LRTE D   +  
Sbjct: 684 ITKLPFASPSDPVGQARADWLKSQGRDPFSELVVPATGARLLQWTGRALRTEADEAVVVC 743

Query: 689 LDRRVVTQRYGKAILNALPPFR 710
            D R++ Q YG+ +L  LPP+R
Sbjct: 744 YDARLLRQSYGRRMLKGLPPYR 765