Pairwise Alignments

Query, 714 a.a., Rad3-related DNA helicases from Pseudomonas stutzeri RCH2

Subject, 636 a.a., DinG family ATP-dependent helicase YoaA from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  213 bits (543), Expect = 2e-59
 Identities = 195/697 (27%), Positives = 306/697 (43%), Gaps = 101/697 (14%)

Query: 22  GLKARYGQRLMIAEVAKVLGTIKTDAEGRRESEPAVVAVEAGTGTGKTVAYSLAAIPTAK 81
           G K R  QR M   V + +            ++P VV  EAGTGTGKT AY   A+    
Sbjct: 17  GFKPREPQRQMAVAVTQAI----------ENAQPLVV--EAGTGTGKTYAYLAPAL---- 60

Query: 82  AAGKRLVIATATVALQEQIVHKDLPDLMRNSGLNFSFALAKGRGRYLCLSKLDLLLQEGQ 141
            AGK+++I+T + ALQ+Q+  +DLP + +        AL KGR  YLCL +L+       
Sbjct: 61  RAGKKVIISTGSKALQDQLYSRDLPTVAKALAFTGKTALLKGRSNYLCLERLE------- 113

Query: 142 AQSATAQLFEEEGFRIEVDERSQKLFTSMIEKLAGNRWDGDRDSWPEELGDSD-WSQLTT 200
            Q A A      G  + V   S  +   ++   +    DGD  +      DS  W  +T+
Sbjct: 114 -QQALA------GGDLPVQTLSDVI---LLRSWSNQTRDGDISTCVSVAEDSQAWPLVTS 163

Query: 201 DHSQCTGRHCPNFQQCAFYKAREGMTKVDVIVTNHDMVLADLAL---GGGAVLPDPRETI 257
            +  C G  CP +++C   KAR+     DV++ NH + LAD+ +   G G ++P     +
Sbjct: 164 TNDNCLGSDCPLYKECFVVKARKKAMDADVVIVNHHLFLADMVVKESGFGELIPQAE--V 221

Query: 258 YVFDEGHHLPDKAIGHFAHFTRLRSTADWLGQVEKNLTKLLAQHPLPGELGRLVEGIPEL 317
            +FDE H LPD A  +F      R   D    + K++T                      
Sbjct: 222 MIFDEAHQLPDIASQYFGQSLSSRQLLD----LAKDITIAYRT----------------- 260

Query: 318 ARELRTQQQFMFSACEQLADFKAGEDMEGRERPRHRFVGGVVPEHLVELGTELKKGFAKL 377
             EL+  QQ      ++ AD  A    + R +       G + E L +  + +++ F  L
Sbjct: 261 --ELKDTQQL-----QKCADRLAQSAQDFRLQLGEPGYRGNLRELLAD--SRIQRAFLLL 311

Query: 378 TDLFTRIAELLKEDMDGETGSGIASHQAEEWYPLFGSLLTRSQGNWELWTAFTVEDPEDS 437
            D      ++ K  +        A  +A  +      L   +Q  +  W   T       
Sbjct: 312 DDTLELCYDVAKLSLGRSALLDAAFERATLYRSRLKRLKEINQPGYSYWYECT------- 364

Query: 438 PPMARWLTLAEGGALFDIEVNASPILAAETLRRNLWNVAFGALVTSATLTALNSFDRYRM 497
              +R  TLA            +P+  A+  +  +       + TSATL+  +    +  
Sbjct: 365 ---SRHFTLA-----------LTPLTVADKFKEVMEQKPGSWIFTSATLSVNDDLHHFTA 410

Query: 498 RAGLPKGAVTAVVPSPFHHADAGVLRVPDL--KADPRDAAAHTAAIVRELPALVEGARGT 555
           R G+ + A + ++PSPF +    +L VP    + +   AA   AA++R +   +E   G 
Sbjct: 411 RLGIEQ-AESMLLPSPFDYTRQALLCVPRNLPQTNQPGAARQLAAMLRPI---IEANNGR 466

Query: 556 -LVLFSSRKQMQDVFDGLERDWRRRVLIQGNLSKQETLNKHKARVDDGESSVLFGLASFA 614
             +L +S   M+D+ +         VL+QG  SK + L +  +      +++L   +SF 
Sbjct: 467 CFMLCTSHAMMRDLAEQFRATMTLPVLLQGETSKGQLLQQFVS----AGNALLVATSSFW 522

Query: 615 EGVDLPGAYCEHVVIAKIPFAVPDDPVEAALAEWIGARGGNPFMEIAVPDASLRLVQACG 674
           EGVD+ G     V+I K+PF  PDDP+  A  E    RGG+PF E+ +PDA + L Q  G
Sbjct: 523 EGVDVRGDTLSLVIIDKLPFTSPDDPLLKARMEDCRLRGGDPFDEVQLPDAVITLKQGVG 582

Query: 675 RLLRTETDRGTITLLDRRVVTQRYGKAILNALPPFRR 711
           RL+R   DRG + + D R+V + YG   L +LPP  R
Sbjct: 583 RLIRDADDRGVLVICDNRLVMRPYGATFLASLPPAPR 619