Pairwise Alignments

Query, 714 a.a., Rad3-related DNA helicases from Pseudomonas stutzeri RCH2

Subject, 716 a.a., ATP-dependent DNA helicase from Escherichia coli BL21

 Score =  321 bits (822), Expect = 9e-92
 Identities = 246/725 (33%), Positives = 357/725 (49%), Gaps = 54/725 (7%)

Query: 2   LSTELKSQIQGAYTRFLEA-KGLKARYGQRLMIAEVAKVLGTIKTDAEGRRESEPAVVAV 60
           L+  LK+QI   Y    E       R  QR MIA+VAK L       EGR       +A+
Sbjct: 3   LTAALKAQIAAWYKALQEQIPDFIPRAPQRQMIADVAKTLA----GEEGRH------LAI 52

Query: 61  EAGTGTGKTVAYSLAAIPTAKAAGKRLVIATATVALQEQIVHKDLPDLMRNSGLNFSFAL 120
           EA TG GKT++Y +  I  A+   K LV++TA VALQ+QI  KDLP L++    +  F  
Sbjct: 53  EAPTGVGKTLSYLIPGIAIAREEQKTLVVSTANVALQDQIYSKDLP-LLKKIIPDLKFTA 111

Query: 121 AKGRGRYLCLSKLDLLLQEGQAQSATAQLFEEEGFRIEVDERSQKLFTSMIEKLAGNRWD 180
           A GRGRY+C   L  L      Q       ++E      ++  QK    +   L   +WD
Sbjct: 112 AFGRGRYVCPRNLTALASTEPTQQDLLAFLDDE--LTPNNQEEQKRCAKLKGDLDTYKWD 169

Query: 181 GDRDSWPEELGDSDWSQLTTDHSQCTGRHCPNFQQCAFYKAREGMTKVDVIVTNHDMVLA 240
           G RD     + D  W +L+TD + C  R+C  +++C F+ AR  + + +V+V NH +V+A
Sbjct: 170 GLRDHTDIAIDDDLWRRLSTDKASCLNRNCYYYRECPFFVARREIQEAEVVVANHALVMA 229

Query: 241 DLALGGGAVLPDPRETIYVFDEGHHLPDKAIGHFAHFTRLRSTADWLGQVEKNLTKLLAQ 300
             A+   AVLPDP+  + V DEGHHLPD A         +  TA W        TKL+A 
Sbjct: 230 --AMESEAVLPDPKNLLLVLDEGHHLPDVARDALEMSAEI--TAPWYRLQLDLFTKLVAT 285

Query: 301 HPLPGELGRLVEGIPELARELRTQQQFMFSACEQLADFKAGED------MEGRERPRHRF 354
                E  R  + IP LA   R         CE+L +  A  +      M   +   HRF
Sbjct: 286 CM---EQFR-PKTIPPLAIPERLNAH-----CEELYELIASLNNILNLYMPAGQEAEHRF 336

Query: 355 VGGVVPEHLVELGTELKKGFAKLTDLFTRIAELLKEDMDGETGSGIASHQAEEWYPLFGS 414
             G +P+ ++E+   L    AKLT++   +AEL   D+  +TGS    H     + L   
Sbjct: 337 AMGELPDEVLEICQRL----AKLTEMLRGLAELFLNDLSEKTGS----HDIVRLHRLILQ 388

Query: 415 LLTRSQGNWE----LWTAFTVEDPEDSPPMARWLTLAEGGALFDIEVNASPILAAETLRR 470
           +  R+ G +E    LW   ++     +P + +W T  E      +  +   I  ++ L R
Sbjct: 389 M-NRALGMFEAQSKLWRLASLAQSSGAP-VTKWATREEREGQLHLWFHCVGIRVSDQLER 446

Query: 471 NLWNVAFGALVTSATLTALNSFDRYRMRAGLPKGAVTAVVP--SPFHHADAGVLRVPDLK 528
            LW      +VTSATL +LNSF R +  +GL + A    V   SPF+H + G + +P ++
Sbjct: 447 LLWRSIPHIIVTSATLRSLNSFSRLQEMSGLKEKAGDRFVALDSPFNHCEQGKIVIPRMR 506

Query: 529 ADPR--DAAAHTAAIVRELPALVEGAR--GTLVLFSSRKQMQDVFDGLERDWRRRVLIQG 584
            +P   +   H A +       VE  +  G LVLF+S + MQ   D +  D R  +L+QG
Sbjct: 507 VEPSIDNEEQHIAEMAAFFRKQVESKKHLGMLVLFASGRAMQRFLDYVT-DLRLMLLVQG 565

Query: 585 NLSKQETLNKHKARVDDGESSVLFGLASFAEGVDLPGAYCEHVVIAKIPFAVPDDPVEAA 644
           +  +   +  H+ RV +GE SVL GL SFAEG+DL G     V I KI F   D PV   
Sbjct: 566 DQPRYRLVELHRKRVANGERSVLVGLQSFAEGLDLKGDLLSQVHIHKIAFPPIDSPVVIT 625

Query: 645 LAEWIGARGGNPFMEIAVPDASLRLVQACGRLLRTETDRGTITLLDRRVVTQRYGKAILN 704
             EW+ +    PF   ++P AS  L+Q  GRL+R+    G + + D+R++T+ YGK +L+
Sbjct: 626 EGEWLKSLNRYPFEVQSLPSASFNLIQQVGRLIRSHGCWGEVVIYDKRLLTKNYGKRLLD 685

Query: 705 ALPPF 709
           ALP F
Sbjct: 686 ALPVF 690