Pairwise Alignments

Query, 284 a.a., Membrane proteins related to metalloendopeptidases from Pseudomonas stutzeri RCH2

Subject, 340 a.a., murein hydrolase activator NlpD from Pectobacterium carotovorum WPP14

 Score =  192 bits (489), Expect = 7e-54
 Identities = 111/257 (43%), Positives = 142/257 (55%), Gaps = 30/257 (11%)

Query: 56  YIVRRGDTLWSIAFRFGWDWRELARVNGIQPPHVIYPGQKIRFDGGSSRVASA------- 108
           Y V+RGDTL+ IA+  G D+R+LA+ N I  P+ +  GQ +    GS   AS        
Sbjct: 86  YTVKRGDTLFYIAWITGNDYRDLAQRNNIPEPYSLNVGQSLSLGSGSGNNASGGGLTSGG 145

Query: 109 ---APRPAPQPAPAPAPSSPVVVATPIPRQ------------------PAITTPSSQPPA 147
              A   A +      PSS  +  T +  Q                  P    P++ P +
Sbjct: 146 GMLATTDATRGGVPTPPSSAQIQTTSVDSQSTNAYSGNQGKQNVGKMLPTTGAPTTAPVS 205

Query: 148 APPASTQVTPVARSASGWAWPANGAIIGRFSSNGSLNKGIDIAGELGQPVLAASDGTVVY 207
           AP A       A     W WP +G +I  FS +   NKGIDIAG  GQP+ A + G VVY
Sbjct: 206 APAAVASSNTAA--VGSWRWPTDGKVIDSFSDSEGGNKGIDIAGSRGQPITATASGRVVY 263

Query: 208 AGSGLRGYGELVIIKHSDTYVSAYGHNRRLLVREGQQVKAGQSIAEMGSTGTDRVKLHFE 267
           AG+ LRGYG L+IIKH+D Y+SAY HN  +LVRE Q V AGQ IA MGSTGT  V+LHFE
Sbjct: 264 AGNALRGYGNLIIIKHNDDYLSAYAHNDTMLVREQQDVTAGQKIATMGSTGTSSVRLHFE 323

Query: 268 IRRQGKPVDPLQYLPRR 284
           IR +GK V+PL++LP+R
Sbjct: 324 IRYKGKSVNPLRFLPQR 340