Pairwise Alignments

Query, 394 a.a., Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains from Pseudomonas stutzeri RCH2

Subject, 337 a.a., two-component system response regulator RssB from Serratia liquefaciens MT49

 Score =  109 bits (273), Expect = 1e-28
 Identities = 85/317 (26%), Positives = 150/317 (47%), Gaps = 20/317 (6%)

Query: 8   LLIIDDDDVVRASLAAYLDDSGFRVLQAANGPQGMDLFDSEQPDLVICDLRMPQMDGLEL 67
           +L+++D+ V R+ L  YL   G    +A NG   + L D   PDL++CDL MP+MDG+E 
Sbjct: 10  ILVVEDELVFRSVLVGYLKSLGAETSEAPNGLLALSLVDDVHPDLILCDLAMPEMDGIEF 69

Query: 68  IRQISERQIDLPVIVVSGAGVMSDAVEALRLGAADYLIKPLEDLAMLEHSVRRALDRSRL 127
           +  +  + + +PV+V+S    M+D  + LRLG  D L+KP+ DL  L  +V   L  +  
Sbjct: 70  VEHLRLQGVQIPVLVISATDKMADIAKMLRLGVQDVLLKPVTDLNRLREAVLGCLYPNMF 129

Query: 128 ---RLENRRYREQLETANRDLQASLHLLQEDQDAGRQVQMNMLPVTPWSVDGFDFAHQII 184
               +E     +  +  +++   ++ LL++ Q           P    +V      ++ +
Sbjct: 130 TSPAIEEVELLQDWDALSKNPSEAVKLLKQLQ-----------PPVQQTVAHCRINYRQL 178

Query: 185 PSLYLSGDFVDYFRVDERRIGFYLADVSGHGASSAFVTVLLKFMTTRLLYESRRGGMLRE 244
            +    G  +D   + ++ + FY  DV+  G +     +LL+ +   LL +       R 
Sbjct: 179 TTGENPGLVLDIAALSDKDLAFYCLDVTRAGDNGVLAALLLRALFNGLLQDHLANQRQRL 238

Query: 245 FKPSEVLDHINRGLINCKLGKHVTMLGGVIDQEH-DVLHYSIGGHLPMPVLYTGDSAHYL 303
            + S +L  +N+ L   KL     +L G    E+ +++  S G H     + TGD+   L
Sbjct: 239 PQMSALLKQVNQLLRQGKLEGQFPLLVGYYHAEYKNLILVSAGLHAN---VNTGDNQIQL 295

Query: 304 EGRGLPVGLFVEATYQN 320
              G+P+G  + ATY N
Sbjct: 296 -SNGVPLGT-LGATYMN 310