Pairwise Alignments

Query, 394 a.a., Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains from Pseudomonas stutzeri RCH2

Subject, 338 a.a., two-component system response regulator RssB from Dickeya dianthicola ME23

 Score =  103 bits (258), Expect = 6e-27
 Identities = 92/321 (28%), Positives = 143/321 (44%), Gaps = 27/321 (8%)

Query: 8   LLIIDDDDVVRASLAAYLDDSGFRVLQAANGPQGMDLFDSEQPDLVICDLRMPQMDGLEL 67
           +L+++D+ V R+ LA YL   G  V +A NG   ++    + PDL+ICDL MP M G E 
Sbjct: 10  ILVVEDEAVFRSVLAGYLTSLGADVHEADNGKDALEKMAHQSPDLIICDLNMPLMGGFEF 69

Query: 68  IRQISERQIDLPVIVVSGAGVMSDAVEALRLGAADYLIKPLEDLAMLEHSVRRALDRSRL 127
           + ++    I  PV+VVS    ++D    LRLG  D L+KP+ D   L  SV   L  +  
Sbjct: 70  VERLRLHDITTPVLVVSATNHLADIARVLRLGVQDVLLKPIHDYTRLRESVMACLYPTMF 129

Query: 128 RL---ENRRYREQLETANRDLQASLHLLQEDQDAGRQVQMNMLPVTPWSVDGFDFAHQII 184
                E  +    L+T N+   A+  LL++ Q   +Q  +    V    +   D    ++
Sbjct: 130 TSQANEVEQLMHDLDTLNQSPGAASKLLEQLQPPVQQT-LARCRVNYRQLMAVDRPGLVL 188

Query: 185 PSLYLSGDFVDYFRVDERRIGFYLADV----SGHGASSAFVTVLLKFMTTRLLYESRRGG 240
               LSGD           + FY  DV    + HG  +A   +LL+ +   LL E     
Sbjct: 189 DIAALSGD----------ELAFYCLDVTQAANNHGVLAA---LLLRALFNSLLQEHLVHQ 235

Query: 241 MLREFKPSEVLDHINRGLINCKLGKHVTMLGGVIDQE-HDVLHYSIGGHLPMPVLYTGDS 299
             R  +   +L+ +N+ L    L     +L G   +E   ++  S G H  + V    + 
Sbjct: 236 QRRLPELPVLLNQVNQLLRRANLQGRFPLLVGYYHRELKRLILISAGLHATLSV----EE 291

Query: 300 AHYLEGRGLPVGLFVEATYQN 320
            H     G+P+G  +EA Y N
Sbjct: 292 QHIGLNNGVPLGT-LEAAYLN 311