Pairwise Alignments

Query, 650 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

Subject, 635 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  384 bits (986), Expect = e-111
 Identities = 268/659 (40%), Positives = 371/659 (56%), Gaps = 46/659 (6%)

Query: 6   NLFTNLSVGKKLICGFGLVLLLTLGVAGTGFVAVDEILGRAQQIEQLSSVNASILAARGA 65
           +L  + SV  KL  GF LVL L+L +A TG+ A+   L R+Q +  L+ +    +A    
Sbjct: 7   HLLGDASVTLKLALGFSLVLALSLIIAVTGWQALAASLYRSQTLTVLAQL---AVAGEEL 63

Query: 66  ERDFALTRQQSSADALHSSLQQLNTELAGLDASSSAAERAYLTRIRQAAEEYGRQFDRYM 125
             D  L R    A+    SL +L+  +  +D    A     +           +  +   
Sbjct: 64  RADRILYRTLDDAN----SLNRLSASMEKIDGHLKALSNRLIAP---------KPIEYLQ 110

Query: 126 QLIERGVALRTRMQDAAQV------SREEFEFIELDMYDAVRVLRLEGDRLKGSDPLTIA 179
           ++   G    T ++D   +      +REE +       D +  L  +    +    L   
Sbjct: 111 EMARIGATFNTTLKDVPSLVKTRENTREELKQSSTRTGDVLAQLASDLPDQEDEKALDAV 170

Query: 180 EATSGLTKQILDMRTQENVFVANSSDAAAKSWGELHGNVTAIGSNLKVWLNDDQQASMDK 239
           E      +Q  D R Q   + A+S DA A++  +   N+               QA++ K
Sbjct: 171 ENLRQAIEQAED-RAQSPAWAASSLDAYAQAVNDAERNLELA------------QAAVAK 217

Query: 240 ALAELEQYRAAFDEFRQNRGERLELERSMAQQSEVVIAAADEALANASNAMQQQQ----- 294
              +    + A  E R  R  RL+  +   ++S+  +    + L   S+ + Q Q     
Sbjct: 218 LPVDSTALKNAVLEIR-TRLTRLKEAQLTTEKSQNQLEQQLDQLLGQSDLLSQDQTQRRD 276

Query: 295 ----RSSYLLLGVIGALAIFVGLLAATVISRMIVGPLRSTVQQAQRVANGDLTHSEASAR 350
               ++    LGV  A A+ +G+LAA VI+  IV PLR  +  A R+A GDL+H   + R
Sbjct: 277 HEAEQARTQTLGVTAA-ALLLGVLAAWVIAGQIVTPLRKALSVANRIAEGDLSHEVQTRR 335

Query: 351 RDEVGQLQNAMHGMTQSLRNLIGRIGGGVSQIAAAADQLSAVTAQTSAGVQTQRVETEQV 410
           +DE+GQLQ++M  MT +LR LIG I     QIA+AA++LS +T QT AGV  QR ETEQV
Sbjct: 336 KDELGQLQHSMTQMTLNLRGLIGNISDNAQQIASAAEELSTITEQTRAGVSNQREETEQV 395

Query: 411 ATAMHEMAATVQEVARNAEQASIAARQADQQARQGDRVVQDAVGQIGNLASEVDQSAHAI 470
           A AM++M AT QEVAR+AEQASIAA QA+ Q   GD+VV D V QI +LA E+ +S+ A+
Sbjct: 396 AAAMNQMLATAQEVARHAEQASIAAGQANHQTDLGDQVVTDVVAQIEHLAHEMARSSQAM 455

Query: 471 EALHAESGRIGSVLEVIRAVAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALARRTH 530
            AL  ES +IGSVL+VI++V++QTNLLALNAAIEAARAGE G+GFAVVADEVR+LA+RT 
Sbjct: 456 LALQRESQKIGSVLDVIKSVSQQTNLLALNAAIEAARAGEAGQGFAVVADEVRSLAQRTQ 515

Query: 531 DSTEEIEGLIANLQRVAQQAVEQMQSSRSLTQRTVDLANEAGVALGRITESVSTIEQMNQ 590
            S EEIE LI  L    QQ  + +  SR+LT  +V LA  AG AL  I  +V  I++MN 
Sbjct: 516 QSAEEIEELIGGLHSGTQQVADILDYSRTLTDNSVGLARNAGDALSEIARTVLVIQEMNP 575

Query: 591 QIAAAAEQQSAVAENISESVTRVRDIGDQSASATEQTAGASAELARLGVELQGLVRQFR 649
           QIAAAAE+QSAVAE I+ SV +VRD  +Q+A+A+EQTA AS ELARLG +LQ  V QF+
Sbjct: 576 QIAAAAEEQSAVAEEINRSVLKVRDASEQTAAASEQTAAASIELARLGTDLQQCVGQFK 634