Pairwise Alignments

Query, 642 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain from Pseudomonas stutzeri RCH2

Subject, 897 a.a., diguanylate cyclase from Pseudomonas simiae WCS417

 Score =  372 bits (955), Expect = e-107
 Identities = 220/589 (37%), Positives = 338/589 (57%), Gaps = 14/589 (2%)

Query: 32  AGDSQAWQMGKGALFVALTSALIFLLGRQHFRRFDEQQRAQHVQETSLKQAAAVFDSTQE 91
           +G ++AWQ  + A    L      ++   H RR      A H+ + +++Q+A  F     
Sbjct: 306 SGSTRAWQADEIAFAGELADQFAQVINN-HNRR--TATSALHLFQRAVEQSANAF----- 357

Query: 92  GVLVTDPRQRIVHVNPAFSRITGYSTEEVLGQTPKLFASGKHDAEFYQQMWLALKDKGEW 151
             L+ +    + +VNP+F+ IT YS EEV G       + ++ +E       +L     W
Sbjct: 358 --LLVNCDGVVEYVNPSFTAITQYSAEEVHGHRLAQLPALENLSELLFDAPSSLAKSNSW 415

Query: 152 SGEIWNRRKNGEVYPQWQNLRCIHDNQGQLSHYVAVFSDLSALKRSREELDQLAHYDPLV 211
            GE  +RRKN E Y    ++  ++ +  +L+HY+ ++ D++  K +++ +++LA+ D L 
Sbjct: 416 QGEFKSRRKNLEPYWGQLSISKVYGDNRELTHYIGIYEDITQTKLAQQRIERLAYTDNLT 475

Query: 212 NLPNRLLFTERAKQDLERARAHKRSGALLLIDLDHFKDINESLGHSLGDALLQAVSTRLS 271
           NL NR  F      D   AR      +LLL+D+D+FK IN+SLGH  GD LL +++ RL 
Sbjct: 476 NLGNRPAFIRNL--DERFARDSDSPISLLLVDIDNFKRINDSLGHQTGDKLLISLARRLR 533

Query: 272 EHLEKGMTLGRLGGDEFALLCEGYGAEKATALALRILDRLNESFHIGDQELFSSASIGIV 331
             L  G +L R   +EFA+L +    E    +A ++L  L++   + +Q +  + S+G+ 
Sbjct: 534 NSLSTGGSLARFASNEFAVLLDDTDLESGQQVASQLLATLDKPMFVDNQLISVTGSVGLA 593

Query: 332 LYPYPTDVQNAEQLMRNADSALFKAKSSGRSTYAFYSEELTSQARQRVELVTALRQALEQ 391
             P     ++ + LMRNA  AL KAK++G+     ++E L ++A  ++ +   LR+AL Q
Sbjct: 594 CAPLHG--RDPQTLMRNAGLALHKAKANGKHQVQVFTEALNAEASYKLFVENNLRRALTQ 651

Query: 392 GQLRLHYQPIYDLRQGTISGFEALVRWQHPEKGLIAPGVFIPIAEETGLISAIDHWVLEQ 451
            +L + YQP   LR G + G EAL+RW HPEKG+I P  FI +AEETGLI  I  W+  Q
Sbjct: 652 NELDVFYQPKLCLRSGRLLGMEALLRWNHPEKGMIRPDQFISVAEETGLIIPIGKWIARQ 711

Query: 452 ACNQAREWLGQGHPLGFIAVNISSRLFGNGELDLQVATILARSGLEARHLELEITESAVM 511
           AC  +++    G     +A+N+S + F + +L   +A+IL    L A  LELE+TE  ++
Sbjct: 712 ACRMSKQLSASGMGNLQVAINLSPKQFSDPDLVASIASILKEEQLPANLLELELTEGLLL 771

Query: 512 QDPDAALELLQRLRALGVQLAIDDFGTGYSSLQRLKRMNVHKLKIDQGFVRGLPDDRDDA 571
           +  +     L +L++LG+ LA+DDFGTGYSSL  LK+  +  +KID+ F+  +PD++DD 
Sbjct: 772 EATEDTRLQLDQLKSLGLTLAMDDFGTGYSSLSYLKKFPIDIIKIDRSFIHEIPDNQDDM 831

Query: 572 AITRSVIGLAHNLGLKVVAEGIETAEQAAFLLAQNCDYGQGYGFARPQP 620
            IT +VI +AHNL LKVVAEGIETAEQ AFL    CD GQGY F RP P
Sbjct: 832 EITSAVIAMAHNLKLKVVAEGIETAEQLAFLRRHRCDVGQGYLFDRPIP 880