Pairwise Alignments

Query, 856 a.a., PAS domain S-box from Pseudomonas stutzeri RCH2

Subject, 750 a.a., Sensor histidine kinase/response regulator from Pseudomonas putida KT2440

 Score =  164 bits (414), Expect = 2e-44
 Identities = 111/344 (32%), Positives = 186/344 (54%), Gaps = 17/344 (4%)

Query: 470 DAQGMAQRISGTLMDLTERKRVEQM-KNDFVSTVSHELRTPLTSISGALGLIVGGALGSA 528
           + Q M +R + +L    +      + K+ F++T+SHELRTPL  I G   L+ GG L  A
Sbjct: 242 ELQAMVERRTASLARAKDEAEAANLAKSRFLATMSHELRTPLNGILGMAELLRGGRLEVA 301

Query: 529 PASMQQMLEIAYRNSLRLGHLINDLLDMEKIAAGKMSFELREHSLGDLLEESLASNQALC 588
               +Q +E  Y+    L  ++N++L   ++  G+   E    SL  L +E LA  + + 
Sbjct: 302 D---RQRVEALYKAGEGLLAILNEVLYFARLEEGESRAERVVFSLRQLCQEVLALLEPMA 358

Query: 589 EQHG--IRCSLDHPVDVLVWVDGMRLQQVLGNFLSNAVKFTPQGGEIRLHSSLRG----- 641
            ++   ++  +D  +    +     L+QVL N L+NA+KFT + G+++L   +       
Sbjct: 359 MENADTLQLQVDEQLAAYQYGAEQYLRQVLSNLLANAIKFT-EHGQVQLTVQVLANNECS 417

Query: 642 PRVRISVTDQGPGIPEAFRSRVFEKFAQADASDSRQKSGTGLGLAITKELIERMGGTVGF 701
            R+R+SV D G GI  A ++++F++F QA  + +++  GTGLGLAI K L+E++GG++G 
Sbjct: 418 QRLRLSVRDNGIGIEPAVQAKIFDRFVQASEAVTQRYGGTGLGLAICKHLVEKLGGSIGL 477

Query: 702 DCPPGQGTTFWCELPI---QQLASETDSRDDLPR--ILVVEDEPDTGRLLHMMLREGGYG 756
           +   GQG+ FW EL +   Q +++ + +   LP   ILVVED      +   +L   G+ 
Sbjct: 478 ESVQGQGSCFWFELDMARGQPVSAGSPAPSPLPSLDILVVEDVALNREVAGGLLMRDGHR 537

Query: 757 VERVQSLHQAREKLAAGRYEAMTLDLHLPDGSGMQLIDELREKP 800
           V   +   QA +  A  R++ + LD+HLP  SG+ L  +LR  P
Sbjct: 538 VSFAEDASQALQACAQRRFDLVLLDVHLPGMSGVALCRQLRSSP 581