Pairwise Alignments

Query, 856 a.a., PAS domain S-box from Pseudomonas stutzeri RCH2

Subject, 976 a.a., DUF3369 domain-containing protein from Magnetospirillum magneticum AMB-1

 Score =  229 bits (583), Expect = 8e-64
 Identities = 157/478 (32%), Positives = 243/478 (50%), Gaps = 36/478 (7%)

Query: 366 LRLSEERLSLALKGSNDGLWDLDLDAGSMYASPRAWEILGYRPNELTCDLKLWERVTVAE 425
           L+ SEER +LA KG+N+ LWD      ++Y SPR  EILG     L    + W +    E
Sbjct: 321 LKRSEERYALAAKGANEALWDWSPQVQNIYFSPRMEEILGVAAGSLNGSPQTWRQHVHPE 380

Query: 426 DLAQQKARLAQTMLSNVDHFTTELRLQHKHGHVVPVLLRGYIQRDAQGMAQRISGTLMDL 485
           D A  +A L +      D    + R++H  G  + V +RG +     G   R+ G+L D+
Sbjct: 381 DRALLQAGLDEACERRSDTLDLQFRMRHVSGQTLWVRMRGAVSYGPDGAPTRLVGSLGDI 440

Query: 486 TERKRVEQ-------------MKNDFVSTVSHELRTPLTSISGALGLIVGGALGSAPASM 532
           T+RKR EQ              K++F++ +SHE+RTP+ +I G + L++   L     + 
Sbjct: 441 TDRKRYEQERLRSAAAEAASVAKSEFLAVMSHEIRTPMNAILGMIRLLLDSPLDE---TQ 497

Query: 533 QQMLEIAYRNSLRLGHLINDLLDMEKIAAGKMSFELREHSLGDLLEE--SLASNQALCEQ 590
           +   E    +   L  ++ND+LD+ +I AGK+  E     L  +++    L + +A  + 
Sbjct: 498 RDYAETVLSSGEVLLSILNDILDLSRIEAGKLELERIAFDLPKVVDSIIHLMTPRAREKS 557

Query: 591 HGIRCSLDHPVDVLVWVDGMRLQQVLGNFLSNAVKFTPQGGEIRLHSSLR-----GPRVR 645
             +R      V   +  D  RL+QVL N LSNA+KFT + GE+ LH S          +R
Sbjct: 558 LALRSWTAGGVPARLTGDPTRLRQVLLNLLSNAIKFT-EAGEVSLHLSAEIQPDGIAAIR 616

Query: 646 ISVTDQGPGIPEAFRSRVFEKFAQADASDSRQKSGTGLGLAITKELIERMGGTVGFDCPP 705
           + V D G GI    RSR+F  FAQADAS +R+  GTGLGLAI + L+  M G +G D  P
Sbjct: 617 MEVKDTGIGISPEARSRLFANFAQADASITRRFGGTGLGLAICQNLVRLMNGEIGVDSVP 676

Query: 706 GQGTTFW--CELPIQQLASETDSRDDLP-------RILVVEDEPDTGRLLHMMLREGGYG 756
           GQG+TFW    LP+     E  +    P       ++L+ ED P   ++  ++L   G+ 
Sbjct: 677 GQGSTFWFVVRLPVAVALEEGAAAPPSPAKTLRPLKVLLAEDNPVNQKVAILILERSGHK 736

Query: 757 VERVQSLHQAREKLAAGRYEAMTLDLHLPDGSGMQLIDELR--EKPAMQNLPIVVISA 812
           V  V +  QA   +  G Y+ + +D+ +P+  G++    +R  E P  Q +PI+ ++A
Sbjct: 737 VTGVNNGAQALRAVQEGDYDIVLMDMQMPEMDGLESTRRIRALEAPVAQ-IPILALTA 793