Pairwise Alignments

Query, 323 a.a., tRNA-dihydrouridine synthase from Pseudomonas stutzeri RCH2

Subject, 337 a.a., tRNA-dihydrouridine synthase B from Pseudomonas putida KT2440

 Score =  116 bits (291), Expect = 7e-31
 Identities = 89/265 (33%), Positives = 133/265 (50%), Gaps = 23/265 (8%)

Query: 3   IALAPMEGLVDEILRDVLTRMGGVDWCVTEFIRVSDRLL---PKSSFRKLA---PELTSG 56
           + LAPM G+ D+  R +  R+G     V+E +  SD  L    KSS R++    PE    
Sbjct: 15  LILAPMAGVTDQPFRTLCQRLGA-GMVVSEMVS-SDMSLWNSRKSSLRRIHEGDPE---- 68

Query: 57  AVTRAGTPVRVQLLGSDPVCLADNAAFACALGAPAIDLNFGCPAKTVNKSRGGAVLLKEP 116
                  P  VQ+ G D   +A  A      GA  ID+N GCPAK V     G+ LL++ 
Sbjct: 69  -------PRSVQIAGGDAQMMAAAAKANVEAGAQIIDINMGCPAKKVCNKAAGSALLRDE 121

Query: 117 ELLHAILCEVRRAVPAHVPVTAKMRLGFDSPD-SAIDCARALVDGGAGQLVVHARTKVEG 175
            L+  IL  V  AV   VPVT K+R G+D  + + ++ A+     G   L VH RT+ + 
Sbjct: 122 ALVSEILHAVVSAVD--VPVTLKIRTGWDRANKNGLNVAKIAEQAGIQALAVHGRTRADL 179

Query: 176 YKPPAHWEWIARVQEAVSVPVYANGDIWSLADWQRCREVSGAENIMLGRGLVSRPDLARQ 235
           Y   A ++ I  +++AVS+PV+ANGDI S    +   E +G + +++GR    RP + R+
Sbjct: 180 YTGEAEYDTIGAIKQAVSIPVFANGDITSPEKARAVLETTGVDGLLIGRAAQGRPWIFRE 239

Query: 236 IA-AAKQGLSLPEMSWAEFQPTLVD 259
           I    + G  LP     E +  L++
Sbjct: 240 IEHYLRTGEHLPAPQLDEVERILLE 264