Pairwise Alignments

Query, 204 a.a., RNA methyltransferase, RsmD family from Pseudomonas stutzeri RCH2

Subject, 193 a.a., 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD from Rhodanobacter sp000427505 FW510-R12

 Score =  161 bits (408), Expect = 6e-45
 Identities = 87/184 (47%), Positives = 115/184 (62%), Gaps = 2/184 (1%)

Query: 15  GQLRIIGGEWRSRRFSFPDAEGLRPTPDRVRETLFNWIAPYLSGARVLDPFTGSGAIYLE 74
           G++RIIGG  R+ R   P+  GLRPTP+RVRETLFNW+AP L GAR LD   G+GA+ +E
Sbjct: 10  GRIRIIGGSLRNSRLEVPELPGLRPTPERVRETLFNWLAPVLGGARCLDLCAGTGALGIE 69

Query: 75  ALSRGASMALALDVNANAIASLRKHLDTLNCGHGQLLQSDALRYLDTQSPTPFDLVFLDP 134
           ALSRGA+    ++ +  A  +LR +L  L    GQ+   +A  +L   +   +DLVFLDP
Sbjct: 70  ALSRGAASVQFVERDRQAAQALRANLARLKADGGQVAALEAEAFLHGAAQV-YDLVFLDP 128

Query: 135 PFNKNLLQPACELLETKGWLAEHAWIYTESEAVPSSLGLPGNWRLHREKKAGKVHYALWE 194
           PF   L       LE  GWLAE +WIY ES    +   LP  W+LHRE  AG+V +AL+ 
Sbjct: 129 PFALQLWPTLARQLEQGGWLAERSWIYVESPRGQAPT-LPPTWQLHREGHAGEVRFALYR 187

Query: 195 RSVP 198
           R++P
Sbjct: 188 RALP 191