Pairwise Alignments

Query, 670 a.a., DNA polymerase III, subunit gamma and tau from Pseudomonas stutzeri RCH2

Subject, 541 a.a., DNA polymerase III subunits gamma and tau (EC 2.7.7.7) from Sphingobium sp. HT1-2

 Score =  318 bits (814), Expect = 5e-91
 Identities = 193/448 (43%), Positives = 257/448 (57%), Gaps = 43/448 (9%)

Query: 3   YQVLARKWRPRSFREMVGQTHVLKALINALDNQRLHHAYLFTGTRGVGKTTIARIIAKCL 62
           Y+VLARK+RPR+FRE++GQ  +++ L NA+   RL HA+L TG RGVGKT+ AR+IAK L
Sbjct: 8   YRVLARKYRPRNFRELIGQDAMVQTLGNAIRRGRLAHAFLMTGVRGVGKTSTARLIAKAL 67

Query: 63  NC-----ETGVSSTPCGQCSVCREIDEGRFVDLIEVDAASRTKVEDTRELLDNVQYAPSR 117
           NC     + G +  PCG C  C  I EGR +D++E+DAAS T V+D RE+++ V+YA   
Sbjct: 68  NCIGPDGQGGPTIDPCGVCEPCMAIAEGRHIDVVEMDAASHTGVDDVREIIEAVRYAAVS 127

Query: 118 GRYKVYLIDEVHMLSSHSFNALLKTLEEPPPHVKFLLATTDPQKLPVTILSRCLQFSLKN 177
            RYK+Y+IDEVHMLS ++FNALLKTLEEPP HVKFL ATT+  K+PVT+LSRC +F L+ 
Sbjct: 128 ARYKIYIIDEVHMLSKNAFNALLKTLEEPPAHVKFLFATTEVNKVPVTVLSRCQRFDLRR 187

Query: 178 MPPERVVEHLTHVLSVENVPFEDDALWLLGRAADGSMRDAMSLTDQAIAF-----GEGKV 232
           +P E +  H  HV+  E V  E DAL L+ +AA+GS RD +S+ DQAIA      GE  V
Sbjct: 188 IPAEMLAGHFAHVVEAEKVAAEPDALSLIAQAAEGSARDGLSILDQAIAHAEMGEGEPMV 247

Query: 233 LAADVRAMLGTLDHGQVYGVLQALLEGDARALLEAVRHLAEQGPDWAGVLAEILNVLHRV 292
            AA VR MLG  D G    +L  LLEGD  ALL  VR     G +   ++  +L ++H V
Sbjct: 248 TAAQVREMLGLSDRGSTRRLLGLLLEGDTAALLGGVRDQYALGVEPLSLMRGLLELVHAV 307

Query: 293 AIAQALPEAVDNGQGDRDR--VLALAQALPAEDVQFYYQMGLIGRRDLPLAPDPRSGFEM 350
            + +A  +    GQ D +R  +   A  +    +   +Q+ L G  ++  A  P    EM
Sbjct: 308 TLVKAGRDIATPGQSDEERGALADWASQIGFGPLHRLWQLMLKGHDEVATAALPIEACEM 367

Query: 351 VLLRMLAFRPAGNDDAPRTPLKTLGVSPATADSKPAAVADMVPLGV---SPASAPTASAV 407
            LLR                     V  A     P+ +A M+  GV   +PA    ASA 
Sbjct: 368 ALLR---------------------VMHAATMPDPSDLARMLQGGVPTAAPAMLGQASAA 406

Query: 408 VAPAPAPIAPVSIAEPSAPAASEPAVAA 435
            APAP P +       S PA  E  + A
Sbjct: 407 AAPAPEPAS-------SLPATFEDLIEA 427