Pairwise Alignments

Query, 474 a.a., cytochrome c oxidase, cbb3-type, subunit I from Pseudomonas stutzeri RCH2

Subject, 553 a.a., Cytochrome c oxidase (cbb3-type) subunit CcoN (EC 1.9.3.1) from Sphingobium sp. HT1-2

 Score =  619 bits (1597), Expect = 0.0
 Identities = 285/469 (60%), Positives = 363/469 (77%), Gaps = 5/469 (1%)

Query: 7   TAYSYKVVRQFAIMTVVWGIVGMGLGVFIAAQLAWPFLNLDLPWTSFGRLRPLHTNAVIF 66
           T Y   ++R   I T+ WG+VG  +GV IA Q+  P LNL+ PW SFGR+RPLHT+AVIF
Sbjct: 69  TRYDDDLIRLGVIATLFWGVVGFLVGVVIATQMVVPTLNLE-PWFSFGRMRPLHTSAVIF 127

Query: 67  AFGGCALFATSYYSVQRTCQTTLFAPKLAAFTFWGWQLVILLAAISLPLGFTSSKEYAEL 126
           AFGG AL ATS+Y VQRTC+  L  P LA F FWG+Q  I+LAA    +G T+S+EYAE 
Sbjct: 128 AFGGNALIATSFYVVQRTCRARLAFPALARFVFWGYQFFIVLAATGYLMGVTASREYAEP 187

Query: 127 EWPIDILITIVWVAYAIVFFGTLATRKVKHIYVGNWFFGAFILTVAILHIVNNLEIPVTA 186
           EW +D+ +TIVWVAY +VF GTL  R   HIYV NWF+ +FI+T+A+LHIVNNL +P + 
Sbjct: 188 EWYVDLWLTIVWVAYFVVFVGTLLRRTEPHIYVANWFYLSFIITIAMLHIVNNLAVPASL 247

Query: 187 M--KSYSVYAGATDAMVQWWYGHNAVGFFLTAGFLGIMYYFVPKQAERPVYSYRLSIVHF 244
              KSYS +AG  DA+ QWWYGHNAVGFFLTAGFL +MYYFVPKQAERP+YSYRLSI+HF
Sbjct: 248 FGSKSYSAFAGVQDALTQWWYGHNAVGFFLTAGFLAMMYYFVPKQAERPIYSYRLSIIHF 307

Query: 245 WALITVYIWAGPHHLHYTALPDWAQSLGMVMSLILLAPSWGGMINGMMTLSGAWHKLRSD 304
           W+LI +YIWAGPHHLHYTALPDWAQ+LGMV S++L  PSWGGMING+MTL+GAW K+R+D
Sbjct: 308 WSLIFLYIWAGPHHLHYTALPDWAQTLGMVFSVVLWMPSWGGMINGLMTLNGAWDKIRTD 367

Query: 305 PILRFLVVSLAFYGMSTFEGPMMAIKTVNALSHYTDWTIGHVHAGALGWVAMVSIGALYH 364
           PI+R +V +LAFYGM+TFEGPM++IK VN+LSHYT+WTIGHVH+GALGW  M++  ALY+
Sbjct: 368 PIIRMMVFALAFYGMATFEGPMLSIKAVNSLSHYTEWTIGHVHSGALGWNGMITFAALYY 427

Query: 365 LIPKVFGRAQMHSVALINTHFWLATIGTVLYIASMWVNGIAQGLMWRAINDDGTLTYSFV 424
           L+P+++GR +++S+ ++N HFWLAT+G VLY A++WV GI QGLM R    DG L Y+F 
Sbjct: 428 LVPRLWGRERLYSLRMVNWHFWLATLGLVLYAAALWVAGITQGLMAREYGSDGYLVYAFA 487

Query: 425 EALEASHPGFVVRMIGGAIFFAGMLVMAYNTWRTV--QAAKPAEYDAAA 471
           E + A  P + +R++GG ++  G L+M YN W T+  +  K A   +AA
Sbjct: 488 EIVAAMKPYYAIRVLGGLLYLLGALIMVYNVWMTILGRLRKEAPMSSAA 536