Pairwise Alignments

Query, 474 a.a., cytochrome c oxidase, cbb3-type, subunit I from Pseudomonas stutzeri RCH2

Subject, 529 a.a., Cytochrome c oxidase subunit 1 from Pseudomonas putida KT2440

 Score = 68.9 bits (167), Expect = 4e-16
 Identities = 56/259 (21%), Positives = 110/259 (42%), Gaps = 18/259 (6%)

Query: 157 IYVGNWFFGAFILTVA---ILHIVNNLEIPVTAMKSYSVYAGATDAM----VQWWYGHNA 209
           ++V  W   AF+L      +  +V  + + +    S+   AG  D +    V W++GH  
Sbjct: 200 LFVWTWLITAFLLIAVMPVLAGVVTMMLMDIHFGTSFFSAAGGGDPVLFQHVFWFFGHPE 259

Query: 210 VGFFLTAGFLGIMYYFVPKQAERPVYSYRLSIVHFWAL--ITVYIWAGPHHLHYTALPDW 267
           V   +   F G +   +P  + +P++ Y   +    A+  ++  +WA  HH+    +P  
Sbjct: 260 VYIMILPAF-GAVSSIIPAFSRKPLFGYTSMVYATGAIAFLSFIVWA--HHMFVVGIPVV 316

Query: 268 AQSLGMVMSLILLAPSWGGMINGMMTLSGAWH-KLRSDPILRFLVVSLAFYGMSTFEGPM 326
            +   M  ++++  P+   + N + T+   W   L  +  + F +  +  + +  F G M
Sbjct: 317 GELFFMYATMLIAVPTGVKVFNWVSTM---WEGSLTFETPMLFAIAFVILFTIGGFSGLM 373

Query: 327 MAIKTVNALSHYTDWTIGHVHAGALGWVAMVSIGALYHLIPKVFGRAQMHSVALINTHFW 386
           +AI   +   H T + + H H   +         + Y+ +PK  G   M+   L   HFW
Sbjct: 374 LAIAPADFQYHDTYFVVAHFHYVLVPGAIFGIFASAYYWLPKWTG--HMYDETLGKLHFW 431

Query: 387 LATIGTVLYIASMWVNGIA 405
           L+ +G  +    M   G+A
Sbjct: 432 LSFVGMNMAFFPMHFVGLA 450



 Score = 25.8 bits (55), Expect = 0.004
 Identities = 16/73 (21%), Positives = 27/73 (36%)

Query: 338 YTDWTIGHVHAGALGWVAMVSIGALYHLIPKVFGRAQMHSVALINTHFWLATIGTVLYIA 397
           +   T  H      G V    +G    +IP + G   M    + N  FWL     +L ++
Sbjct: 73  FNQMTTMHGLIMVFGAVMPAFVGLANWMIPLMIGAPDMALPRMNNFSFWLLPAAFLLLVS 132

Query: 398 SMWVNGIAQGLMW 410
           +++  G      W
Sbjct: 133 TLFSPGGGPNFGW 145