Pairwise Alignments

Query, 296 a.a., cytochrome c oxidase, subunit II from Pseudomonas stutzeri RCH2

Subject, 375 a.a., cytochrome B559 subunit alpha from Pseudomonas simiae WCS417

 Score = 94.0 bits (232), Expect = 5e-24
 Identities = 69/280 (24%), Positives = 120/280 (42%), Gaps = 46/280 (16%)

Query: 5   VANVWWAMFGFSVLVLLVVSALWIYAMLRRPQTYTDEQALRINRRWIIGGGLILPTVSII 64
           V ++   +F   V++ ++V     ++M+   ++ T + A + +    +   ++   V ++
Sbjct: 39  VFDLHMTIFWICVVIGIIVFGAMFWSMILHRRS-TGQVAAKFHESTTVE--ILWTVVPLL 95

Query: 65  ALLAFGIPTGRGMLPLPVEGEQPLRIQVIGHQWWWEVRYPESGV---------------- 108
            L+A  IP  + ++ +    E  + IQV G+QW W  +Y    V                
Sbjct: 96  ILIAMAIPATKTLINIYDSSESDIDIQVTGYQWKWHYKYLGQDVEFFSNLATPAEQIHNQ 155

Query: 109 -VTANQFILPADRPVDVEV--------TSADVIHSFWVPRLGGKLDMVPGRTNTLRLQAS 159
                 ++L  D+P+ + V        T+ADVIHS+WVP    K D +PG  N    +  
Sbjct: 156 ATKGEHYLLEVDQPLVLPVGAKVRFLVTAADVIHSWWVPAFAVKRDAIPGFVNEAWTRVE 215

Query: 160 QAGVFRGQCSEFCGSQHAHMILHVEALEADAFASWIEARR--------------ELQHQP 205
           + G++RGQC+E CG  H  M + VE      + +W+  R+               L+   
Sbjct: 216 KPGIYRGQCAELCGKDHGFMPIVVEVKSKADYETWLGERKAEAAKLKELTSKEWTLEELV 275

Query: 206 PSGDAGRVFAERCGQCHRVTGVSEGNRAPDL--SDLATRP 243
             GD  +V+   C  CH+  G       P L  S +AT P
Sbjct: 276 ARGD--KVYHTTCVACHQAEGQGLPPMFPALKGSKIATGP 313