Pairwise Alignments

Query, 296 a.a., cytochrome c oxidase, subunit II from Pseudomonas stutzeri RCH2

Subject, 375 a.a., cytochrome c oxidase subunit 2 from Pseudomonas putida KT2440

 Score = 92.8 bits (229), Expect = 1e-23
 Identities = 70/283 (24%), Positives = 117/283 (41%), Gaps = 46/283 (16%)

Query: 5   VANVWWAMFGFSVLVLLVVSALWIYAMLRRPQTYTDEQALRINRRWIIGGGLILPTVSII 64
           V ++   +F   V++ +VV     ++M+   ++   + A      W+    ++   V  +
Sbjct: 39  VFDLHMTIFWICVIIGIVVFGAMFWSMVIHRRSTGQQAAHFHEHTWV---EILWTVVPFL 95

Query: 65  ALLAFGIPTGRGMLPLPVEGEQPLRIQVIGHQWWWEVRY--------------------- 103
            L+   IP  + ++ +    E  + +QV G+QW W  +Y                     
Sbjct: 96  ILVVMAIPATKTLIDIYDASESDIDVQVTGYQWKWHYKYLGQDVEFFSNLATPTDQIHNK 155

Query: 104 ---PESGVVTANQ-FILPADRPVDVEVTSADVIHSFWVPRLGGKLDMVPGRTNTLRLQAS 159
               E  ++  +Q  +LP    V   VT+ADVIHS+WVP    K D +PG  N    +  
Sbjct: 156 APKDEHYLLEVDQPLVLPVGAKVRFLVTAADVIHSWWVPAFAVKRDAIPGFVNEAWTRIE 215

Query: 160 QAGVFRGQCSEFCGSQHAHMILHVEALEADAFASWIEARR--------------ELQHQP 205
           + G++RGQC+E CG  H  M + VE      + +W+  R+               L+   
Sbjct: 216 KPGIYRGQCTELCGKDHGFMPVVVEVKSKADYDTWLGERKAEAAKLKELTSKEWTLEELV 275

Query: 206 PSGDAGRVFAERCGQCHRVTGVSEGNRAPDL--SDLATRPTLG 246
             GD  +V+   C  CH+  G       P L  S +AT P  G
Sbjct: 276 ERGD--KVYHTTCVACHQAEGQGLPPMFPALKGSKIATGPKEG 316