Pairwise Alignments

Query, 379 a.a., 2-methylbutanoyl-CoA dehydrogenase (EC 1.3.8.5) (from data) from Pseudomonas stutzeri RCH2

Subject, 375 a.a., short-chain acyl-CoA dehydrogenase from Pseudomonas putida KT2440

 Score =  640 bits (1651), Expect = 0.0
 Identities = 316/375 (84%), Positives = 348/375 (92%)

Query: 1   MLPNEDQNAIAEMARQFAQERLKPFAEQWSREHRYPAEAIGEMAALGFFGMLVPEQWGGS 60
           ML N++Q  IA+  R FAQERLKPFAEQW ++HR+P EAI EMA LG FGMLVPEQWGGS
Sbjct: 1   MLVNDEQQQIADAVRAFAQERLKPFAEQWDKDHRFPKEAIDEMAELGLFGMLVPEQWGGS 60

Query: 61  DTGYLAYAMALEEIAAGDGACSTIMSVHNSVGCVPILRFGNEQQKSDFLTPLARGEQIGA 120
           DTGY+AYAMALEEIAAGDGACSTIMSVHNSVGCVPILRFGNEQQK  FLTPLA G  +GA
Sbjct: 61  DTGYVAYAMALEEIAAGDGACSTIMSVHNSVGCVPILRFGNEQQKEQFLTPLATGAMLGA 120

Query: 121 FALTEPQAGSDASSLRTRARRDGDHYVLNGAKQFITSGKHAGTVIVFAVTDPDAGKGGIS 180
           FALTEPQAGSDASSL+TRAR +GDHYVLNG+KQFITSG++AG VIVFAVTDP+AGK GIS
Sbjct: 121 FALTEPQAGSDASSLKTRARLEGDHYVLNGSKQFITSGQNAGVVIVFAVTDPEAGKRGIS 180

Query: 181 AFIVPTDSPGYQVVRVEDKLGQHASDTCQIAFEDLRVPVANRLGEEGEGYRIALANLEGG 240
           AFIVPTDSPGYQV RVEDKLGQHASDTCQI F++++VPVANRLG EGEGY+IALANLEGG
Sbjct: 181 AFIVPTDSPGYQVARVEDKLGQHASDTCQIVFDNVQVPVANRLGAEGEGYKIALANLEGG 240

Query: 241 RIGIAAQAVGMARAAFEAARDYARDRETFGKPIIEHQAVAFRLADMATQIAVARQMVHHA 300
           RIGIA+QAVGMARAAFE ARDYA +R++FGKP+IEHQAVAFRLADMAT+I+VARQMV HA
Sbjct: 241 RIGIASQAVGMARAAFEVARDYANERQSFGKPLIEHQAVAFRLADMATKISVARQMVLHA 300

Query: 301 AALREVGRPALVEASMAKLFASEMAEKVCSAAIQTLGGYGYLADFPVERIYRDVRVCQIY 360
           AALR+ GRPALVEASMAKLFASEMAEKVCS A+QTLGGYGYL+DFP+ERIYRDVRVCQIY
Sbjct: 301 AALRDAGRPALVEASMAKLFASEMAEKVCSDALQTLGGYGYLSDFPLERIYRDVRVCQIY 360

Query: 361 EGTSDIQRLVISRNL 375
           EGTSDIQR+VI+RNL
Sbjct: 361 EGTSDIQRMVIARNL 375