Pairwise Alignments

Query, 296 a.a., ABC-type nitrate/sulfonate/bicarbonate transport system, permease component from Pseudomonas stutzeri RCH2

Subject, 273 a.a., ABC transporter permease from Pseudomonas simiae WCS417

 Score =  108 bits (271), Expect = 1e-28
 Identities = 86/267 (32%), Positives = 124/267 (46%), Gaps = 18/267 (6%)

Query: 34  SRSGW---LALAILPFALLLALYLTSSTQRLELNPNDKLLPSFGQMSAAVERLAFTPDKR 90
           +RS W   L   +LP  +LL L         E+      LPS+ QM A  E      D  
Sbjct: 17  NRSAWPRRLKGLVLPVLILLVL---------EVVVRVGWLPSY-QMPAPSEIAVTLTDLA 66

Query: 91  SGDYLFWQDTASSLKRLGIGLAIAAVAGLCLGIAAGTLPLFSAPLSPLLTVLSMVPPLAI 150
            G    W+  ++SL R+ +G AI A   L      G      A L P    L  +P LA 
Sbjct: 67  EGS--LWKHISASLGRVLLGFAIGASLALVFAAWVGLSREAEAYLEPTFAGLRSIPSLAW 124

Query: 151 LPILFIVFGLGELSKVMLIVIGITPILARDLEQRAREIPRELLIKAQTLGANTWTLILRL 210
           +P+L +  G+ E SK++LI IG    +  +     R+I R+L+   Q  G + W L+ R+
Sbjct: 125 VPLLLLWLGIDETSKIVLIAIGAFFPVYLNGVAAIRDIDRKLVEVGQMYGFSRWRLVRRI 184

Query: 211 VLPQLMPRLLISLRLVLGSAWLFLIAAEAIASTDGLGYRIFLVRRYMAMDVILPYVAWIT 270
           +LP  +P L   LR  L  AW+FL+AAE IA+T GLGY +   R     D++L  +  + 
Sbjct: 185 LLPAALPGLFTGLRSGLSLAWMFLVAAELIAATKGLGYLLSDGRETSRPDIVLAAIIVLA 244

Query: 271 LLAWAMDFTLRRLTQLLFPW---YEGA 294
            L    D  L  L +    W   ++GA
Sbjct: 245 SLGKVSDGLLATLEKRCLAWRDTFQGA 271