Pairwise Alignments

Query, 296 a.a., ABC-type nitrate/sulfonate/bicarbonate transport system, permease component from Pseudomonas stutzeri RCH2

Subject, 280 a.a., Histidine ABC transporter, permease protein from Variovorax sp. SCN45

 Score =  100 bits (249), Expect = 4e-26
 Identities = 63/198 (31%), Positives = 104/198 (52%)

Query: 93  DYLFWQDTASSLKRLGIGLAIAAVAGLCLGIAAGTLPLFSAPLSPLLTVLSMVPPLAILP 152
           +Y F  D   ++ R+  G  +AAV  + LGIA GT     A   P ++    +P  A +P
Sbjct: 80  EYGFIGDIGMTVWRVFGGFLLAAVFAVPLGIAMGTWKTVEAFFEPFVSFCRYLPASAFIP 139

Query: 153 ILFIVFGLGELSKVMLIVIGITPILARDLEQRAREIPRELLIKAQTLGANTWTLILRLVL 212
           +L +  GLGE+ K+++I IG    +   +        R+L+  A TLGAN+  ++ R+++
Sbjct: 140 LLILWAGLGEMQKLLVIFIGSFFQIVLMVAVTVGGARRDLVEAAYTLGANSRGIVARVLI 199

Query: 213 PQLMPRLLISLRLVLGSAWLFLIAAEAIASTDGLGYRIFLVRRYMAMDVILPYVAWITLL 272
           P   P +  +LRLVLG AW ++I AE I S+ G+G+ I   +  +    I+  +  I ++
Sbjct: 200 PGAAPGIAETLRLVLGWAWTYVIVAELIGSSSGIGHMITDSQALLNTGQIIFGIIVIGVI 259

Query: 273 AWAMDFTLRRLTQLLFPW 290
               DF  + L + LF W
Sbjct: 260 GLLSDFAFKALNRRLFAW 277