Pairwise Alignments

Query, 330 a.a., Outer membrane protein and related peptidoglycan-associated (lipo)proteins from Pseudomonas stutzeri RCH2

Subject, 344 a.a., Outer membrane porin F from Pseudomonas putida KT2440

 Score =  397 bits (1019), Expect = e-115
 Identities = 208/351 (59%), Positives = 244/351 (69%), Gaps = 28/351 (7%)

Query: 1   MKLKNTLGVVIGSMVAATSLSALAQGQGAVEVEAFGKHYFTDSSRDVQRDGELYGAGVSY 60
           MKLKNTLG+ IGS+VAATS+ A+AQGQGAVE E F K  F DS RD + DG L+G  + Y
Sbjct: 1   MKLKNTLGLAIGSLVAATSIGAMAQGQGAVETEIFYKKEFFDSQRDFKNDGNLFGGSIGY 60

Query: 61  FLTDDVSLGLSYGEYHDLTSKDPVGVDGGHKNIKGSLTSLDAAYHFGAPGVGLRPYVSAG 120
           FLTDDV L L Y E H+   +D        KNIKGS T+LDA YHF  P   +RPYVSAG
Sbjct: 61  FLTDDVELRLGYDEVHNARGEDG-------KNIKGSNTALDAVYHFNNPYDAIRPYVSAG 113

Query: 121 VAHQSIGQADRGGRDSSTFANVGTGLKYYFTENFFAKASVDGMYNIDADEAEWMAGVGVG 180
            +HQS+GQ  RGGRD STFANVG G K+Y T+ F+A+A V+  YNID  + EW   VGVG
Sbjct: 114 FSHQSLGQTGRGGRDHSTFANVGAGAKWYITDMFYARAGVEAQYNIDQGDTEWAPSVGVG 173

Query: 181 LNFGGGARQVAA--------------------VEPTPEPAPAPIVDTEPEPA-PELVRVE 219
           LNFGG  +Q  A                    V+  P+      VD +  PA  E+VRVE
Sbjct: 174 LNFGGSPKQAEAAPAPVAEVCSDSDNDGVCDNVDKCPDTPANVTVDADGCPAVAEVVRVE 233

Query: 220 LDVKFDFDKSRVREESYSDIKNLADFMQQYPQTSTTVEGHTDSVGTDQYNQRLSERRAEA 279
           LDVKFDFDKS V+  SY DIKNLADFM+QYPQT+T VEGHTDSVG D YNQ+LSERRA A
Sbjct: 234 LDVKFDFDKSVVKPNSYGDIKNLADFMKQYPQTTTVVEGHTDSVGPDAYNQKLSERRANA 293

Query: 280 VRNVLVNEYGVEGGRVNSVGYGESRPVADNSTEEGRQINRRVEAEVEAQVQ 330
           V+ VL  +YGVE  RV+SVGYGE+RPVADN+TEEGR +NRRVEA+VEAQ +
Sbjct: 294 VKQVLTQQYGVESSRVDSVGYGETRPVADNATEEGRAVNRRVEAQVEAQAK 344