Pairwise Alignments

Query, 495 a.a., RND family efflux transporter, MFP subunit from Pseudomonas stutzeri RCH2

Subject, 567 a.a., Copper/silver efflux RND transporter, membrane fusion protein CusB from Variovorax sp. SCN45

 Score =  374 bits (961), Expect = e-108
 Identities = 206/442 (46%), Positives = 285/442 (64%), Gaps = 16/442 (3%)

Query: 46  QVLYWYDPMVPQHRFDKPGKSPFMDMDLVPRYAGEDGDAAAINIDAGITQNLGVRLASVT 105
           ++LY++DPMVP +RFDKP KSPFMDM + P YAG DGD  ++ + A + QNLGVR A V+
Sbjct: 90  KILYYHDPMVPGNRFDKPAKSPFMDMMMSPVYAGGDGDQNSVTVSARVQQNLGVRTAVVS 149

Query: 106 RGQLASQIEAVGVLEYNARDVAVVQVRAGGFVERVYHHAPGDLLDKGTPLADLLIPEWSA 165
            G ++ Q+  VG + +N RD  +VQ RA G+VER+   A  D + KG PLA+L +PEW A
Sbjct: 150 EGTVSPQVTTVGSIAFNERDQVIVQARATGYVERLNVRATLDQVKKGQPLAELYVPEWIA 209

Query: 166 AQEEYLALRRIGEP---ALLEAARQRLRLAGMPAATISQLERTGKVSASITISTPIAGVL 222
           AQEE+L+++R+      +L++ ARQR+R  GM    I  + R+G+    IT+  PI GV+
Sbjct: 210 AQEEFLSVQRMRGTDLASLIDGARQRMRQVGMNDGQIELVARSGRTQPRITLVAPIGGVV 269

Query: 223 QELDVREGMSLAAGAPLARINGLDSVWLEVAVPEAQSTGIRVGQRATARLPAMPGERIEG 282
            EL  REGM+++AG  L RINGL SVW    VPE+QS  +R+G R  AR PA PGE  EG
Sbjct: 270 TELAAREGMTVSAGTTLFRINGLASVWANAEVPESQSALVRLGARVQARTPAAPGETFEG 329

Query: 283 TITAVLPEANAASRTLRVRVQLPNPQGLLRPGL--TAQATLKGADDTSVLLIPSEAVIRT 340
            + A+LP+ N A+RTL+ R++L NP G L PG+  + Q T   AD T  LLIP+EAVI+T
Sbjct: 330 KVQAILPDVNPATRTLKARLELANPTGRLVPGMFVSMQFTDMRADKT--LLIPTEAVIQT 387

Query: 341 GRRSLVMLAEAGGRYRPVEVETGRDSGNQTAIVAGLEEGQQVVASGQFLLDSEASLRGIV 400
           G+R++VMLAE  GR+RPV+VE G ++G QT I  GL+ GQ+VV S QFL+DSEASL+G+ 
Sbjct: 388 GKRAVVMLAEDNGRFRPVDVEIGLETGGQTEIKRGLQAGQRVVVSSQFLIDSEASLKGVE 447

Query: 401 A--------SPATGDTGHAHDHAQIAPALHESEGRVLALSENRLKIAHGPFHTLGMPGMT 452
           A        +  T  T  +   A  AP  H  EG+V +++++ +  +HGP  T+    MT
Sbjct: 448 ARLNAAPGTAAPTAATAASATPAAGAPR-HVGEGKVESITKDAMTFSHGPIPTIKWGAMT 506

Query: 453 MSFAVADSELLRGVQAQDRIRF 474
           M F +        ++  DR  F
Sbjct: 507 MEFKLPPGGTPGNLKPGDRASF 528