Pairwise Alignments

Query, 495 a.a., RND family efflux transporter, MFP subunit from Pseudomonas stutzeri RCH2

Subject, 407 a.a., Cu(+)/Ag(+) efflux RND transporter periplasmic adaptor subunit CusB from Escherichia coli ECRC100

 Score =  303 bits (775), Expect = 1e-86
 Identities = 168/393 (42%), Positives = 237/393 (60%), Gaps = 5/393 (1%)

Query: 21  AAGYWLASQNEHGAEHLEPAVASQAQVLYWYDPMVPQHRFDKPGKSPFMDMDLVPRYAGE 80
           AAG+   ++ E  AE    A   + ++L+WYDPM P  RFDKPGKSPFMDMDLVP+YA E
Sbjct: 19  AAGFTWFAKAEPPAEKTSTA---ERKILFWYDPMYPNTRFDKPGKSPFMDMDLVPKYADE 75

Query: 81  DGDAAAINIDAGITQNLGVRLASVTRGQLASQIEAVGVLEYNARDVAVVQVRAGGFVERV 140
           +  A+ + ID   TQNLGV+ A+VTRG L         + YN    A+VQ RA GF+++V
Sbjct: 76  ESSASGVRIDPTQTQNLGVKTATVTRGPLTFAQSFPANVSYNEYQYAIVQARAAGFIDKV 135

Query: 141 YHHAPGDLLDKGTPLADLLIPEWSAAQEEYLALRRIGEPAL-LEAARQRLRLAGMPAATI 199
           Y    GD + KG PL DL IP+W  AQ EYL LR  G  A   E   +RLRLAGMP A I
Sbjct: 136 YPLTVGDKVQKGAPLLDLTIPDWVEAQSEYLLLRETGGTATQTEGILERLRLAGMPEADI 195

Query: 200 SQLERTGKVSASITISTPIAGVLQELDVREGMSLAAGAPLARINGLDSVWLEVAVPEAQS 259
            +L  T K+    T+  PI GV+   D+R GM++A    +A+I G+D VW+  A+PE+ +
Sbjct: 196 RRLIATQKIQTRFTLKAPIDGVITAFDLRAGMNIAKDNVVAKIQGMDPVWVTAAIPESIA 255

Query: 260 TGIRVGQRATARLPAMPGERIEGTITAVLPEANAASRTLRVRVQLPNPQGLLRPGLTAQA 319
             ++   + T  +PA P + +      +LP  +AA+RTL++R+++ N    L+PG+ A  
Sbjct: 256 WLVKDASQFTLTVPARPDKTLTIRKWTLLPGVDAATRTLQLRLEVDNADEALKPGMNAWL 315

Query: 320 TLKGADDTSVLLIPSEAVIRTGRRSLVMLAEAGGRYRPVEVETGRDSGNQTAIVAGLEEG 379
            L  A +  +LLIPS+A+I TG    V+  +A GR+ P  V   + S   TA+ +GL EG
Sbjct: 316 QLNTASE-PMLLIPSQALIDTGSEQRVITVDADGRFVPKRVAVFQASQGVTALRSGLAEG 374

Query: 380 QQVVASGQFLLDSEASLRGIVASPATGDTGHAH 412
           ++VV+SG FL+DSEA++ G +    +    HAH
Sbjct: 375 EKVVSSGLFLIDSEANISGALERMRSESATHAH 407