Pairwise Alignments

Query, 759 a.a., Rad3-related DNA helicases from Pseudomonas stutzeri RCH2

Subject, 751 a.a., ATP-dependent DNA helicase from Pseudomonas simiae WCS417

 Score =  998 bits (2579), Expect = 0.0
 Identities = 494/755 (65%), Positives = 574/755 (76%), Gaps = 5/755 (0%)

Query: 1   MSYRVAVRALCEFTAKVGDLDLRFTPSPTALEGIAGHAQVTARRGDGYEREITLEGQYGQ 60
           MSY VAVRALCEFTAKVGDLDLRFTPSP+A EGI GH  V +RR   Y+ E+ LEG+Y Q
Sbjct: 1   MSYSVAVRALCEFTAKVGDLDLRFTPSPSAQEGIIGHRTVASRRSAHYQNEVALEGEYQQ 60

Query: 61  LSVRGRADGYDPARNRLEEIKTFRGDLERQPANHRQLHWAQAKLYGWLLCQTRGLDELEL 120
           L VRGRADGYDP  NRLEE+KT+RGDL+ QPANHRQLHWAQ K+YGWL+CQ   L  + L
Sbjct: 61  LKVRGRADGYDPDANRLEEVKTYRGDLDAQPANHRQLHWAQVKVYGWLMCQKLNLSHINL 120

Query: 121 ALVYFDVTSHKETLFVERHAAAALRAFFETQCQAFIAWAEQEMAHRAARDQALSNLRFPH 180
           ALVYFD+    ET+  +R  AA L  FF  QC  F+ WA+QEMAHR AR+ A   L FPH
Sbjct: 121 ALVYFDIVGEGETVLNQRFQAAELEPFFNQQCALFLGWAQQEMAHREARNSAAQTLAFPH 180

Query: 181 DDFRAGQRQLAEAVYKAACTGTTLMAQAPTGIGKTLATLFPQLKAFPGQQLDKLFFLAAK 240
             FR GQR LAE+VYKA  TG  LMAQAPTGIGKT+ T+FP LKA   Q+LDKLFFL AK
Sbjct: 181 AGFRPGQRSLAESVYKAVSTGRCLMAQAPTGIGKTIGTIFPLLKALAPQRLDKLFFLTAK 240

Query: 241 TSGRKLALDALHTLRRSGAGE-LRVLELIARDKACEHPDKACHGESCPLARGFYDRLPAA 299
           T GRKLALDA   L  S   + LRVLEL+ARDKACEH DKACHG++CPLA+GFYDRLPAA
Sbjct: 241 TPGRKLALDAAQVLHASSPDQPLRVLELVARDKACEHLDKACHGDACPLAKGFYDRLPAA 300

Query: 300 RAAALQHCMLDQATLRGVALEHEVCPYYLSQELARWADVVVGDYNYYFDISALLYGLTQS 359
           R AA +  +LDQ  LR VAL H+VCPYYLSQE+ARWAD+VV DYNYYFD  A+L+GL Q 
Sbjct: 301 RIAAAKVRLLDQRNLRDVALAHDVCPYYLSQEMARWADLVVADYNYYFDFGAMLFGLAQL 360

Query: 360 NDWRACVLVDEAHNLLERARGMYSAELDQRTFVGLSSKAPAPLKRPLSRVQRCWNELHRE 419
           N WRA VLVDEAHNL+ERAR MYSA LDQ     L   AP PLK+PL R+ R WN LH++
Sbjct: 361 NQWRAAVLVDEAHNLVERARSMYSASLDQYHLKTLRETAPEPLKQPLQRLNRAWNALHKD 420

Query: 420 QVATYQVQAELPLKLLGALQQAVSAITDYLGEQPTGLDADLQRAYFDAMHFCRVAELFGA 479
           Q+A YQ     P KLL AL    SA+ +Y  + P  L  DLQR YF+ + F +VAELF  
Sbjct: 421 QLAPYQAYTARPEKLLQALSLCASAMGEYFNDHPESLSGDLQRFYFEVLQFGKVAELFNE 480

Query: 480 HSLFDVSLLPATARSKARRSILCLRNVVPAPFLAPRLAQARSSVLFSATLSPRRFHADML 539
           H +FD+S        K   S LCLRNVVPA F+ PRL  ARSSVLFSATLSPR ++AD+L
Sbjct: 481 HFIFDIS--KRQLNGKRSSSTLCLRNVVPAEFIRPRLTAARSSVLFSATLSPRHYYADLL 538

Query: 540 GLPAASAWIDVESPFQSRQLRVCLAGHVSTRYQDRQASLGAVVELVARQYLERPGNYLAF 599
           GLPA +AWIDVESPF++ QL V +   +STR+  R ASL  +VEL+ARQY ++PGNYLAF
Sbjct: 539 GLPADTAWIDVESPFKAEQLHVRIVDEISTRFVHRHASLEPIVELIARQYTQQPGNYLAF 598

Query: 600 FSSFDYLQQVTALLREHYPDVPFWEQTRGMQEAARNAFLERFTEHSEGIGFAVLGGAFAE 659
           FSSFDYLQQV  LL E +P +  W+Q+RGM EA R AFL++FTEHS+GIGFAVLGGAF E
Sbjct: 599 FSSFDYLQQVAQLLAEKHPTITLWQQSRGMAEAERQAFLDQFTEHSQGIGFAVLGGAFGE 658

Query: 660 GIDLPGQRLIGAFVATLGLPQVNPVNEQFKTRLDELFGRGHGYDYTYLYPGLQKVVQAAG 719
           GIDLPG RLIGAF+ATLGLPQ+NPVNEQ K R+  +FG   GYDYTYLYPG+QKVVQAAG
Sbjct: 659 GIDLPGARLIGAFIATLGLPQLNPVNEQMKLRMGAIFGA--GYDYTYLYPGIQKVVQAAG 716

Query: 720 RVIRTQQDEGVVHLIDDRFSRSQVRRLLPSWWALS 754
           RVIR+QQD+GVV LIDDRF  ++VR+LLP WW ++
Sbjct: 717 RVIRSQQDQGVVMLIDDRFGEARVRQLLPRWWTVA 751