Pairwise Alignments

Query, 759 a.a., Rad3-related DNA helicases from Pseudomonas stutzeri RCH2

Subject, 762 a.a., conserved protein of unknown function from Pseudomonas putida KT2440

 Score =  958 bits (2476), Expect = 0.0
 Identities = 487/753 (64%), Positives = 557/753 (73%), Gaps = 5/753 (0%)

Query: 1   MSYRVAVRALCEFTAKVGDLDLRFTPSPTALEGIAGHAQVTARRGDGYEREITLEGQYGQ 60
           +SY VAVRALCEF+AKVGDLDLRFTPSPTA EGI GH +V ARR  GYE EI LEGQ+  
Sbjct: 10  LSYSVAVRALCEFSAKVGDLDLRFTPSPTAQEGIEGHQRVVARRAAGYESEIALEGQFET 69

Query: 61  LSVRGRADGYDPARNRLEEIKTFRGDLERQPANHRQLHWAQAKLYGWLLCQTRGLDELEL 120
           L VRGRADGYDPA NRLEEIKT RGDL RQPANHRQLHWAQAK+YGWL+CQ R L  +E+
Sbjct: 70  LRVRGRADGYDPASNRLEEIKTHRGDLARQPANHRQLHWAQAKVYGWLMCQARQLPAIEV 129

Query: 121 ALVYFDVTSHKETLFVERHAAAALRAFFETQCQAFIAWAEQEMAHRAARDQALSNLRFPH 180
           ALVY DV S  +TLF E  +AA L+AFFETQCQ F+ WA  +    A RDQ L  L FP+
Sbjct: 130 ALVYLDVDSDGQTLFTEHCSAAELQAFFETQCQRFLGWARWQQRRLAERDQGLLALSFPY 189

Query: 181 DDFRAGQRQLAEAVYKAACTGTTLMAQAPTGIGKTLATLFPQLKAFPGQQLDKLFFLAAK 240
             FR GQRQLAE +YKA  TG  LMAQA TGIGKTL TLFP LKA   QQLDKLFFL AK
Sbjct: 190 PQFRKGQRQLAETLYKAVSTGRCLMAQASTGIGKTLGTLFPLLKAMVPQQLDKLFFLTAK 249

Query: 241 TSGRKLALDALHTLR-RSGAGELRVLELIARDKACEHPDKACHGESCPLARGFYDRLPAA 299
           T GR LALDAL  +   +    LR LELIARDKACE+PDKACHGESCPLA GFYDRLPAA
Sbjct: 250 TPGRALALDALRQITDATPQPALRTLELIARDKACEYPDKACHGESCPLAAGFYDRLPAA 309

Query: 300 RAAALQHCMLDQATLRGVALEHEVCPYYLSQELARWADVVVGDYNYYFDISALLYGLTQS 359
           R AA    +LD+A LR VAL H+VCPYYL QE+ARWADV+V DYNYYFD  ALL+GLTQ 
Sbjct: 310 REAAAALPLLDRANLREVALAHQVCPYYLGQEMARWADVLVADYNYYFDAHALLFGLTQL 369

Query: 360 NDWRACVLVDEAHNLLERARGMYSAELDQRTFVGLSSKAPAPLKRPLSRVQRCWNELHRE 419
           N WR  VLVDEAHNL+ER RGMYSA LDQ   + L    P  L   L R+ R WN L++E
Sbjct: 370 NQWRVAVLVDEAHNLVERGRGMYSASLDQGQLLALRQSKPPGLVSALDRLNRQWNALYKE 429

Query: 420 QVATYQVQAELPLKLLGALQQAVSAITDYLGEQPTGLDADLQRAYFDAMHFCRVAELFGA 479
           Q A YQ    LP  LL ALQQ V  I + + + PT +D  + + Y+ A+ FCRVAELF  
Sbjct: 430 QRAPYQASESLPEGLLRALQQCVGVIQEQMNQAPTHIDPQVLQFYYQALQFCRVAELFDE 489

Query: 480 HSLFDVSLLPATARSKARRSILCLRNVVPAPFLAPRLAQARSSVLFSATLSPRRFHADML 539
           H LFD+S        K R + LCLRNV PA  LAPR+  ARS  LFSATLSPR F++D+L
Sbjct: 490 HFLFDIS--QRQGPRKRRLATLCLRNVTPARLLAPRMQAARSVTLFSATLSPRHFYSDLL 547

Query: 540 GLPAASAWIDVESPFQSRQLRVCLAGHVSTRYQDRQASLGAVVELVARQYLERPGNYLAF 599
           G+PA +AW+DV +PF++ QL V +A  VSTRYQ RQASL  +V+L+ARQY   PGNYLAF
Sbjct: 548 GMPADTAWLDVAAPFRAEQLEVRIASQVSTRYQQRQASLAPIVDLIARQYERMPGNYLAF 607

Query: 600 FSSFDYLQQVTALLREHYPDVPFWEQTRGMQEAARNAFLERFTEHSEGIGFAVLGGAFAE 659
           FSSF+YLQQV  LL E +  +P W Q  GM EAAR AFL+RF     G+GFAVLGGAF E
Sbjct: 608 FSSFEYLQQVAGLLAEQHGQIPLWSQEPGMDEAARQAFLDRFVADGRGVGFAVLGGAFGE 667

Query: 660 GIDLPGQRLIGAFVATLGLPQVNPVNEQFKTRLDELFGRGHGYDYTYLYPGLQKVVQAAG 719
           G+DLPG RLIGAFVATLGLPQVNPVNEQFK RL   FG   G+DY YLYPG++KV+QAAG
Sbjct: 668 GVDLPGTRLIGAFVATLGLPQVNPVNEQFKQRLGRQFGA--GFDYAYLYPGVRKVIQAAG 725

Query: 720 RVIRTQQDEGVVHLIDDRFSRSQVRRLLPSWWA 752
           RVIR  QD GV+ LID+RF+  +V+++ P WWA
Sbjct: 726 RVIRGDQDRGVLVLIDERFAEPRVQQMFPGWWA 758