Pairwise Alignments

Query, 759 a.a., Rad3-related DNA helicases from Pseudomonas stutzeri RCH2

Subject, 757 a.a., ATP-dependent DNA helicase from Paraburkholderia sabiae LMG 24235

 Score =  947 bits (2448), Expect = 0.0
 Identities = 473/753 (62%), Positives = 570/753 (75%), Gaps = 4/753 (0%)

Query: 1   MSYRVAVRALCEFTAKVGDLDLRFTPSPTALEGIAGHAQVTARRGDGYEREITLEGQYGQ 60
           M+Y VAVR LCEFTA+ GDLDLRFTP+P+ALEGIAGH  VTARR  GYE EITL G +  
Sbjct: 1   MTYVVAVRTLCEFTARRGDLDLRFTPAPSALEGIAGHQVVTARRASGYETEITLTGSHHG 60

Query: 61  LSVRGRADGYDPARNRLEEIKTFRGDLERQPANHRQLHWAQAKLYGWLLCQTRGLDELEL 120
           L+VRGRADGYDPA NRLEEIKT RGDLER PANHR LHWAQA +YG LLC+ RGL EL++
Sbjct: 61  LTVRGRADGYDPALNRLEEIKTHRGDLERMPANHRALHWAQALVYGHLLCEARGLVELDV 120

Query: 121 ALVYFDVTSHKETLFVERHAAAALRAFFETQCQAFIAWAEQEMAHRAARDQALSNLRFPH 180
           ALVYFD+   KET+  E+H AA+LRAFFE QC  F+AWA +E  HR AR+ AL+ LRFP+
Sbjct: 121 ALVYFDIGEQKETVLTEQHTAASLRAFFEDQCGRFVAWAAREEVHRDARNAALNALRFPY 180

Query: 181 DDFRAGQRQLAEAVYKAACTGTTLMAQAPTGIGKTLATLFPQLKAFPGQQLDKLFFLAAK 240
            +FR+GQR+L+ AV++AA  G  LMAQAPTGIGKTL T+FP LKA     LD++FFL AK
Sbjct: 181 GEFRSGQRELSVAVFRAARDGRCLMAQAPTGIGKTLGTIFPLLKACGADHLDRVFFLTAK 240

Query: 241 TSGRKLALDALHTLRRS-GAGELRVLELIARDKACEHPDKACHGESCPLARGFYDRLPAA 299
           T GR LALDA+ +L RS     LR LEL+ARDKACEHPDK+C GESCPLARGFYDRLPAA
Sbjct: 241 TPGRALALDAIESLHRSESVLPLRTLELVARDKACEHPDKSCDGESCPLARGFYDRLPAA 300

Query: 300 RAAALQHCMLDQATLRGVALEHEVCPYYLSQELARWADVVVGDYNYYFDISALLYGLTQS 359
           R  ALQ   LD+A +R  AL H+VCPYY++QE+ RW DVV+GDYNYYFD SA+LY LTQ 
Sbjct: 301 RDTALQARTLDRAAVREAALAHDVCPYYVAQEMTRWCDVVIGDYNYYFDGSAMLYALTQL 360

Query: 360 NDWRACVLVDEAHNLLERARGMYSAELDQRTFVGLSSKAPAPLKRPLSRVQRCWNELHRE 419
           N WR  VL DEAHNL +RAR MYSA LDQ  F G     PA LK+P  R+ R WN L+RE
Sbjct: 361 NGWRVAVLADEAHNLPDRARRMYSATLDQAAFRGARHIVPAALKKPFDRLNREWNALNRE 420

Query: 420 QVATYQVQAELPLKLLGALQQAVSAITDYLGEQPTGLDADLQRAYFDAMHFCRVAELFGA 479
           +   Y+V  ++P KL  A+Q  +++I D L E P  +D +  R YFDA+HF  + E FG 
Sbjct: 421 RNVAYEVLPDVPAKLQSAVQNLIASIGDQLAEAPHSVDENALRFYFDALHFMSLVEEFGD 480

Query: 480 HSLFDVSLLPATARSKAR-RSILCLRNVVPAPFLAPRLAQARSSVLFSATLSPRRFHADM 538
           HS+ DV+L      S+A+  + +C+RNV+PAPFL PR A AR++++FS TLSP+ F+ DM
Sbjct: 481 HSIVDVTLESQHGASRAKPATSICVRNVIPAPFLKPRYAAARTTIVFSGTLSPQHFYRDM 540

Query: 539 LGLPAASAWIDVESPFQSRQLRVCLAGHVSTRYQDRQASLGAVVELVARQYLERPGNYLA 598
           LGLP  + W+DVE PF++ QL V +A  VSTR++DR+ SL  +V+L+A+QY ERPGNYL 
Sbjct: 541 LGLPDDTGWLDVEGPFRAEQLEVRVAHRVSTRWRDRERSLEPIVDLIAQQYSERPGNYLG 600

Query: 599 FFSSFDYLQQVTALLREHYPDVPFWEQTRGMQEAARNAFLERFTEHSEGIGFAVLGGAFA 658
           F SSFDYLQ+V   + E +P VP W Q   M EAAR+AFL RF     G+GFAVLGGAF+
Sbjct: 601 FLSSFDYLQRVADSMGERHPHVPIWTQAPRMDEAARDAFLARFAAGGAGVGFAVLGGAFS 660

Query: 659 EGIDLPGQRLIGAFVATLGLPQVNPVNEQFKTRLDELFGRGHGYDYTYLYPGLQKVVQAA 718
           EGIDL G+RLIGAF+ATLGLPQ+N VNEQ +   D  F  G+GYDY YLYPGLQKVVQAA
Sbjct: 661 EGIDLVGERLIGAFIATLGLPQMNDVNEQMRRTFDAQF--GNGYDYAYLYPGLQKVVQAA 718

Query: 719 GRVIRTQQDEGVVHLIDDRFSRSQVRRLLPSWW 751
           GRVIRT++DEGVVHLIDDR+ R+ VRRLLP WW
Sbjct: 719 GRVIRTERDEGVVHLIDDRYQRADVRRLLPRWW 751