Pairwise Alignments

Query, 759 a.a., Rad3-related DNA helicases from Pseudomonas stutzeri RCH2

Subject, 639 a.a., putative ATP-dependent helicase DinG from Alteromonas macleodii MIT1002

 Score = 53.5 bits (127), Expect = 3e-11
 Identities = 137/606 (22%), Positives = 239/606 (39%), Gaps = 78/606 (12%)

Query: 184 RAGQRQLAEAVYKAACTGTTLMAQAPTGIGKTLATLFPQL------------KAFPGQQL 231
           R  Q ++A+AV +A  T  +L+ +A TG GKT A L P L            K    Q  
Sbjct: 24  REAQTEMAKAVKRAIDTTGSLIVEAGTGTGKTFAYLAPALLSDGKAIVSTGTKNLQEQLF 83

Query: 232 DKLFFLAAKTSG--RKLALD-------ALHTLRRSGAG----ELRVLELIARDKACEHPD 278
            +   L  K  G  RK AL         LH + +        E  VL  ++  K      
Sbjct: 84  HRDLPLVKKALGSKRKTALLKGRSNYLCLHRVAQHSGNSTLVEKEVLGQLSEVKRWSSTT 143

Query: 279 KACHGESCPLARGFYDRLPA-ARAAALQHCMLDQATLRGVALEHEVCPYYLSQELARWAD 337
           K   G+      G    LP  AR   L    +D    R    ++E C    ++  A  AD
Sbjct: 144 KT--GDM-----GELKTLPEDARVLPLVTSTVDNCLGRDCP-DYEDCYLVKARRKALDAD 195

Query: 338 VVVGDYNYYF-DISALLYGLTQSNDWRACVLVDEAHNLLERARGMYSAELDQRTFVGLSS 396
           ++V +++ +F D++    G  +       ++ DEAH + + A   +   L  R    ++ 
Sbjct: 196 IIVVNHHLFFADMALKDTGFGELIPEADAIIFDEAHQIPDIASDYFGESLSTRQIHDIAK 255

Query: 397 ----------KAPAPLKRPLSRVQRCWNELH--------REQVATYQVQAELPLKLLGAL 438
                     K    L +   + +   ++L         R   A    + ++ +++ G L
Sbjct: 256 DITLLFRTVLKDAGQLDKAADKCRMIASDLRLLFPDTAERGNWAEALDRDDVRMQV-GKL 314

Query: 439 QQAVSAITDYLGEQPTGLDADLQRAYFDAMHFCRVAELFGAHSLFDVSLLPATARSKARR 498
            +A+  + +   +   G D DL   Y   +      +    +   +VSL   T +   R 
Sbjct: 315 AEALGVLHEVC-KLHIGRDKDLDNMYERVVAAREQLDALSDNKQENVSLWYETTQ---RH 370

Query: 499 SILCLRNV-VPAPFLAPRLAQARSSVLFSATLSPR----RFHADMLGLPAASAWIDVESP 553
            I+ L  + + A F     +  R  +  SATL        F   M GL  A   + ++SP
Sbjct: 371 LIMHLTPLSIAAKFRRFVSSPPRGWIFTSATLMVNGGFDHFQRRM-GLEDAET-LGLDSP 428

Query: 554 FQ-SRQLRVCLAGHVSTRYQDRQASLGAVVELVARQYLERPGNYLAFFSSFDYLQQVTAL 612
           F    Q  +C+  ++     +  A    ++E   R      G     F+S   L+++   
Sbjct: 429 FNYPEQAMLCVPRYLPE--PNSYAMRETLLETAKRLIKASRGRCFLLFTSHAMLREIAQK 486

Query: 613 LREHYPDVPFWEQTRGMQEAARNAFLERFTEHSEGIGFAVLGGAFAEGIDLPGQRLIGAF 672
           L +   D P   Q    ++A  +A+L    E +  +G     GAF EG+D+ G  L+   
Sbjct: 487 LEDEI-DNPLLVQGTTTKQALLDAYLA--DEKAVLMGT----GAFWEGVDVRGNDLVCVM 539

Query: 673 VATLGLPQVNPVNEQFKTRLDELFGRG-HGYDYTYLYPGLQKVVQAAGRVIRTQQDEGVV 731
           +  L  P  +P +   + R++++  RG + +    +   +  + Q AGR+IR   D+GV+
Sbjct: 540 IDKL--PFASPDDPLLQARMEDVKKRGANPFGVIQIPQAVITLKQGAGRLIRDPSDKGVL 597

Query: 732 HLIDDR 737
            + D+R
Sbjct: 598 VICDNR 603