Pairwise Alignments

Query, 539 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

Subject, 676 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  236 bits (602), Expect = 2e-66
 Identities = 149/368 (40%), Positives = 215/368 (58%), Gaps = 9/368 (2%)

Query: 177 LDQEVDRN-----IMISGAIQLLLLVIGVVVMCMTVRHVIIRRINAMRHTMNAMAEDEDL 231
           L+Q + +N     +++S    + LL+  +           +RR+ AM   + A     D+
Sbjct: 313 LEQRLAQNRTHMVVLVSALSAVFLLIFYLYAGFYASTRTTLRRLGAMMDKVAA----GDM 368

Query: 232 SRSVAIGAKDEIGAMGDAFNRMIGKFRHSLEAVAGVTHQLTDVSERVSHVAEKTLAAVNE 291
           + +    ++DE+G +G  FN  + K    +E V     Q+   + +V  V+ ++  AV+ 
Sbjct: 369 TVTFVAQSRDELGDLGQVFNGTVAKIHDLIERVGHTVSQVELQAGQVETVSAQSNQAVSG 428

Query: 292 QRSETDMVASAMNEMSATVQEVARNANQTATASAGADTESKAGVKVATEALDGIEVLIAE 351
           QR + + VA+AMN+MS+T QEVAR+A    +++   + E+ +G  +       I  L  E
Sbjct: 429 QRMQIEQVATAMNQMSSTAQEVARSAAAAVSSAHSVNDETVSGRSLVQSQQGSIARLATE 488

Query: 352 IEKAAQVIQRVESDSASIDMVLGVINGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEV 411
           I+++ QVI ++ +DS SI  VL VI  IAEQTNLLALNAAIEAARAGEQGRGFAVVADEV
Sbjct: 489 IDQSVQVINQLATDSQSISSVLEVIKSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEV 548

Query: 412 RTLASRTQKSTEEIQAMIEQLQSGVRNAVQAMKEAQLRARSGSQCVEKAAQSLGLIATEV 471
           RTLA RTQ STEEI+ MI +LQSGV  AV+AM  +   A       E+  Q+L  I   V
Sbjct: 549 RTLARRTQHSTEEIEQMISRLQSGVAAAVKAMGSSHDMASGTVGQSERVQQALENILGAV 608

Query: 472 GTINEMNTQIATAAEQQSAVAEEINRNISTISRIADTTSTDATQTSEISDELVRLATELN 531
           G I + N QIA A EQQ+AVA +I++NI  I+R  +  +  A QT   S +L     EL 
Sbjct: 609 GMIVDQNQQIAAAVEQQTAVAHDIDQNIVEINRAGEHAAEGAYQTEAASRQLSLQVIELK 668

Query: 532 RLVGQFKL 539
           +L+G F++
Sbjct: 669 QLIGAFRV 676