Pairwise Alignments

Query, 539 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

Subject, 638 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  266 bits (681), Expect = 1e-75
 Identities = 194/558 (34%), Positives = 292/558 (52%), Gaps = 45/558 (8%)

Query: 23  LVAIMSASLFIAASTEKRLVLQVVEQQTKDAADSYFDSINTMMLTGTMAQREVLRKKI-- 80
           L+A + + L  AA   ++   + + +Q +DA   Y  +  TM+  G   +RE  R K+  
Sbjct: 85  LIAKLDSGLQTAADLIEQPDDKALVEQQQDALSQYKKAFATMVQAGL--KREGARSKLGD 142

Query: 81  -----LARPGVIDARIIRSDEVTKVFGP---------------GFDHQSPVDA----LDR 116
                +A+   ++  +++ D VT+                   G+ + + V+A    LD 
Sbjct: 143 TADNAVAKVSEVEKSLLQGDSVTQFNSVVDLSKLIQQARFQVRGYTYSAKVEAEQPALDA 202

Query: 117 RALSGEGIIEVNKQSGGRVLTVINPI--------LAHADYRGTNCLTCHQVAENAVMGAV 168
              + + I E+  Q   +    +            A + YR +       +   +  G  
Sbjct: 203 IDNAVKKITELQGQLPAQYQANLEEASTSLQAYRAAVSQYRDSQTAAAAALKIMSAQGDT 262

Query: 169 RISY-DLKALDQEVDRNIMISGAIQLLLL------VIGVVVMCMTVRHVIIRRINAMRHT 221
            + + D   L Q V R+   + A QLLLL      + G+V      R ++I  +N     
Sbjct: 263 LLGHSDKLTLSQTVVRDADAAHAKQLLLLATVLALIFGLVAAWAITRQIVIP-LNQTLQV 321

Query: 222 MNAMAEDEDLSRSVAIGAKDEIGAMGDAFNRMIGKFRHSLEAVAGVTHQLTDVSERVSHV 281
              +A   DLS ++    +DE+G +  A   M    R  +  ++    Q+   +E++S V
Sbjct: 322 AQRVASG-DLSHNLTSMRQDELGQLQRAMQSMTVGLRELIGGISDGVTQIASAAEQLSAV 380

Query: 282 AEKTLAAVNEQRSETDMVASAMNEMSATVQEVARNANQTATASAGADTESKAGVKVATEA 341
            E+T A VN Q+ ETD VA+AMNEM+ATVQEVARNA + + A+  AD +++ G KV  EA
Sbjct: 381 TEQTSAGVNSQKVETDQVATAMNEMAATVQEVARNAEEASEAAVAADQQAREGDKVVGEA 440

Query: 342 LDGIEVLIAEIEKAAQVIQRVESDSASIDMVLGVINGIAEQTNLLALNAAIEAARAGEQG 401
           +  IE L  E+  +   +  ++ +S  I  VL VI  +A+QTNLLALNAAIEAARAGE G
Sbjct: 441 IAQIERLATEVGNSTVAMGDLKRESDKIGSVLDVIKSVAQQTNLLALNAAIEAARAGEAG 500

Query: 402 RGFAVVADEVRTLASRTQKSTEEIQAMIEQLQSGVRNAVQAMKEAQLRARSGSQCVEKAA 461
           RGFAVVADEVR+LA RTQKSTEEI+ +I  LQSG +     M  ++    S  +   +A 
Sbjct: 501 RGFAVVADEVRSLAQRTQKSTEEIEELIVGLQSGTQQVATIMDNSRGLTDSSVELPRRAG 560

Query: 462 QSLGLIATEVGTINEMNTQIATAAEQQSAVAEEINRNISTISRIADTTSTDATQTSEISD 521
            +L  I   V TI  MN+QIATAAEQQSAVAEEINR++  +  +++ T+  + +T+  S 
Sbjct: 561 SALASITRTVSTIQAMNSQIATAAEQQSAVAEEINRSVLNVRDVSEQTAAASEETAASST 620

Query: 522 ELVRLATELNRLVGQFKL 539
           EL RL T L  LVG+F++
Sbjct: 621 ELARLGTHLQALVGRFRV 638