Pairwise Alignments

Query, 539 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

Subject, 559 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  271 bits (692), Expect = 6e-77
 Identities = 157/356 (44%), Positives = 226/356 (63%), Gaps = 3/356 (0%)

Query: 185 IMISGAIQLLLLVIGVVVMCMTVRHVIIRRINAMRHTMNAMAEDE-DLSRSVAIGAKDEI 243
           + I G   +LLLVI  V M +   + I+R ++ M+  ++ +A  E DL+R +AI ++DE+
Sbjct: 206 LSILGVAVVLLLVIAAVGMLLA--NTILRPLHLMKANLDDIAAGEGDLTRRLAITSQDEL 263

Query: 244 GAMGDAFNRMIGKFRHSLEAVAGVTHQLTDVSERVSHVAEKTLAAVNEQRSETDMVASAM 303
           G +  AFNR + K    +  +  +T QLT +  +VS  A+++  A+  QR ETD VA+A+
Sbjct: 264 GDLAGAFNRFVDKIHGLVRQITEMTSQLTGLVSQVSDQAQRSEQAMERQRHETDQVATAI 323

Query: 304 NEMSATVQEVARNANQTATASAGADTESKAGVKVATEALDGIEVLIAEIEKAAQVIQRVE 363
           N+MS+  QEVAR+A   + A+   D E +A  +V   ++  I  L+ +I  +   +  ++
Sbjct: 324 NQMSSAAQEVARSAQGASVAAQQTDAEGQAAKRVVDGSIAQIHALVNDIRSSGVSLDSLQ 383

Query: 364 SDSASIDMVLGVINGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLASRTQKSTE 423
            D +SI  VL VI  IAEQTNLLALNAAIEAARAGE GRGFAVVADEVR LASRTQ ST+
Sbjct: 384 QDVSSIVSVLSVIRSIAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRALASRTQTSTQ 443

Query: 424 EIQAMIEQLQSGVRNAVQAMKEAQLRARSGSQCVEKAAQSLGLIATEVGTINEMNTQIAT 483
           EIQ MI++LQ+G   AV+AM+ +       S    +A  SL  +A  +GTIN MN QIA+
Sbjct: 444 EIQGMIDRLQTGTEAAVEAMRRSSDAGDGTSAQANEAGASLDTMAQLIGTINSMNAQIAS 503

Query: 484 AAEQQSAVAEEINRNISTISRIADTTSTDATQTSEISDELVRLATELNRLVGQFKL 539
           AAE+Q+AVAEEINR++  I+   D+ + +    ++ S  L  L   L +LVGQF++
Sbjct: 504 AAEEQTAVAEEINRSVHQIAVAVDSVADETQLGAQTSRSLAELGQRLGQLVGQFRI 559