Pairwise Alignments

Query, 311 a.a., AraC-type DNA-binding domain-containing proteins from Pseudomonas stutzeri RCH2

Subject, 292 a.a., transcriptional regulator from Pseudomonas putida KT2440

 Score =  159 bits (401), Expect = 1e-43
 Identities = 93/283 (32%), Positives = 149/283 (52%), Gaps = 4/283 (1%)

Query: 5   IPNYALYGQAALPVWQDLLHLEWINERGDMHQREIKPHQHDSLLQIVYVRSGEGEVSLEN 64
           +P + LYG+       DLLH E I  R  +H  EIKPHQH  L Q++YV+ G+ +V +E 
Sbjct: 8   VPLFKLYGENQAWPGTDLLHCESIPARSRLHHWEIKPHQHAELFQLLYVQRGQAQVEIEG 67

Query: 65  SRMGFHAPCLILLPQRTVHAFRYSPETDGPVITAAQRPLESMARILSSDLLALMQRPAVV 124
            R       + ++P  TVH FR+S +  G V+T     + ++ + L + L  L Q PA  
Sbjct: 68  VRSAIGEAAIQVVPPMTVHGFRFSADIQGYVLTFGTALVANLEQRLGAPLTVLAQ-PACY 126

Query: 125 PLRWDADGEEPIWPLIQLIQTEAHGQERGNVAAGHALLLALLVHVVRLEQPVPIARPANG 184
           PL  D      +  L+  +Q E  G      A   AL+ AL+V + R +Q     R  + 
Sbjct: 127 PLGRD---RVHLRSLVDTLQREYQGSAPARAAMLEALVTALMVWISRRQQQGQAPRNRDE 183

Query: 185 RRSQLLIQFRELVDTHFRQHWPLGLYAEALGITPATLGRATREGLGESPTAIINERVVRE 244
           R   LL Q+  LV+ H+R+H  +  +A  L +    L +  R   G++   ++++R++ E
Sbjct: 184 RDRLLLGQYLRLVEAHYREHLSVEAFAARLNVPSLQLNQLCRALSGQTALQVVHQRLLLE 243

Query: 245 AQRQLAYTTLDIQQIARDLGFDDAAYFSRFFRKQTGLKPSEFR 287
           A+R L YT + I Q++  LGF D  YF+R+F++ +G  P+ +R
Sbjct: 244 ARRNLIYTRMSIGQLSDSLGFTDPTYFARWFKRLSGQTPNAYR 286