Pairwise Alignments

Query, 311 a.a., Transcriptional regulator from Pseudomonas stutzeri RCH2

Subject, 309 a.a., HTH-type transcriptional activator AaeR from Escherichia coli ECRC62

 Score =  172 bits (437), Expect = 7e-48
 Identities = 104/305 (34%), Positives = 165/305 (54%), Gaps = 4/305 (1%)

Query: 1   MDMLQAMRVFVRVVDAGSFTAAAKLADTSTAQVSRLVAELENHLHARLLNRTTRRLALTE 60
           M+ L+ M VF +VV+ GSFTAAA+    S + +S+ V++LE+ L  +LLNR+TR + LTE
Sbjct: 1   MERLKRMSVFAKVVEFGSFTAAARQLQMSVSSISQTVSKLEDELQVKLLNRSTRSIGLTE 60

Query: 61  VGARFLERSREILAQLEQAQEEACGAHLTPRGRLRVHSTTGLGIQLLAGLAGRYGERYPD 120
            G  + +  R +L +++   E+    + TP G LR+  ++ +   +LAGL  +  + YP 
Sbjct: 61  AGRIYYQGCRRMLHEVQDVHEQLYAFNNTPIGTLRIGCSSTMAQNVLAGLTAKMLKEYPG 120

Query: 121 VSLDLTLSQHQPDLLEAGLDVIITLSRELPDSELIAQRLGEVGNVVCAAPGYLEQHGVPR 180
           +S++L      PDL+  GLDV+I +   L DS L ++RLG +  VVCAA  YL Q+G+P 
Sbjct: 121 LSVNLVTGIPAPDLIADGLDVVIRVG-ALQDSSLFSRRLGAMPMVVCAAKSYLTQYGIPE 179

Query: 181 QPSDLQRHRCLRLADPVFADEWRFFADGIEDVIRPCEAFKVNVAEAMASAAEAGMGICLL 240
           +P+DL  H  L  +     +      +GI   + P   F  N    +     AG GI  +
Sbjct: 180 KPADLSSHSWLEYSVRPDNEFELIAPEGISTRLIPQGRFVTNDPMTLVRWLTAGAGIAYV 239

Query: 241 PDYVAAPALQRGALLRLLPRYRLQEKQIHALYPSRRFLDAKIKTWVDFLA---LELPRAF 297
           P       + RG L  LLPRY+   + ++ALY  +  L  K++  ++ L    +E+ + F
Sbjct: 240 PLMWVINEINRGELEILLPRYQSDPRPVYALYTEKDKLPLKVQVVINSLTDYFVEVGKLF 299

Query: 298 ASYHG 302
              HG
Sbjct: 300 QEMHG 304