Pairwise Alignments

Query, 354 a.a., Curlin associated repeat. from Pseudomonas stutzeri RCH2

Subject, 481 a.a., minor curlin subunit CsgB, nucleation component of curlin monomers from Pseudomonas putida KT2440

 Score =  103 bits (257), Expect = 9e-27
 Identities = 104/357 (29%), Positives = 154/357 (43%), Gaps = 55/357 (15%)

Query: 27  SQAITTQNGSDNEAILEQRGGWNLSNQLQQGEGHFSRVEQDGDRNSAQTSQLS-LDNHVE 85
           S+A + Q+G  NEA +EQ  G         G  + S V Q G  N A    L+ +D  ++
Sbjct: 138 SKATSGQSGQRNEAFIEQTFG---------GSNNRSTVNQTGQDNYATAEHLNHVDGDIQ 188

Query: 86  VLQSGSANQVTVVQVSDSFYGHSASIVQLGAANVAELEQAEGNGSQATIHQQGSGNTHRV 145
           V Q G  N     Q   +  G + +I Q G  N  E+ Q    GSQA++ Q G  N   +
Sbjct: 189 VYQEGHDNWAYGDQREGT--GGTIAIGQYGGGNSVEVWQDTQIGSQASVVQTGQSNEGYI 246

Query: 146 EQLYYASRVDSRSSGTDNLTEITQNGAASAT-TQQFGSNNRIT-IEQN-------VYPYG 196
           +Q          S G  N   ++Q G A+A+ + QF +NN  T I Q         Y  G
Sbjct: 247 DQ----------SFGVSNKVSLSQQGNANASWSDQFETNNSTTTITQTGNNNLHFTYQNG 296

Query: 197 GGIN--VYQDGTSNEARVSQY-----GGRYDTGDVA-LRQVGSANDAQVVQWGGFSNLTF 248
             +N  +   G  N    S +     GG++ T   A + Q G+ N   + Q G     T 
Sbjct: 297 ENLNLTINTQGNGNSITASNWKGAKMGGQFGTNQNATINQAGNGNGVNLTQKGADQLATL 356

Query: 249 TQDGVGNELTARQSTRSGTIRGSSVGNDNRVNIDQ-----------SFDGPVLDITQNGW 297
           TQ G GN+++ +Q   S  +     G DN +  DQ              G  + + Q+G+
Sbjct: 357 TQTGKGNQMSTKQDDVSNELYFEQNGTDNILIADQRGTDNYAYGSSQGTGNTITLDQSGY 416

Query: 298 ANEIDAVQHVGYGT-ASISQIGDRNIAVLNQVPGYPLESTSAAIIQNGVGNSASITQ 353
           +N+    Q  G G  A+I Q    N+A + Q      +S  A + Q+GV  SA+ITQ
Sbjct: 417 SNQSYTNQLYGSGNEATIKQTDSINVAYVTQGG----QSNKAFVDQSGVAQSATITQ 469



 Score = 65.9 bits (159), Expect = 2e-15
 Identities = 75/262 (28%), Positives = 112/262 (42%), Gaps = 39/262 (14%)

Query: 108 SASIVQLGAANVAELEQAEGNGSQATIHQQGSGNTHRVEQLYYASRVDSRSSGT------ 161
           ++S  Q G  N+AE+ Q + + + AT +Q G G+ H   Q    S +   ++G       
Sbjct: 25  TSSQTQDGKENIAEVSQTQASFASATQNQTGMGHNHLAVQAESTSDIQQSATGQYNAGYA 84

Query: 162 ----DNLTEITQNGAAS----ATTQQFGSNNR-ITIEQNVYPYGGGINVYQDGTSNEARV 212
               +N ++ITQ+   S      +Q  GSNN  +  +Q V   G    V+QD        
Sbjct: 85  EQLFENGSQITQHAGGSYNDAFASQSLGSNNESLQTQQGV---GNKSTVWQD-------- 133

Query: 213 SQYGGRYDTGDVALRQVGSANDAQVVQWGGFSN--LTFTQDGVGNELTARQSTR-SGTIR 269
           SQ G +  +G     Q G  N+A + Q  G SN   T  Q G  N  TA       G I+
Sbjct: 134 SQEGSKATSG-----QSGQRNEAFIEQTFGGSNNRSTVNQTGQDNYATAEHLNHVDGDIQ 188

Query: 270 GSSVGNDNRVNIDQ-SFDGPVLDITQNGWANEIDAVQHVGYGT-ASISQIGDRNIAVLNQ 327
               G+DN    DQ    G  + I Q G  N ++  Q    G+ AS+ Q G  N   ++Q
Sbjct: 189 VYQEGHDNWAYGDQREGTGGTIAIGQYGGGNSVEVWQDTQIGSQASVVQTGQSNEGYIDQ 248

Query: 328 VPGYPLESTSAAIIQNGVGNSA 349
             G    S   ++ Q G  N++
Sbjct: 249 SFGV---SNKVSLSQQGNANAS 267



 Score = 59.3 bits (142), Expect = 2e-13
 Identities = 49/167 (29%), Positives = 72/167 (43%), Gaps = 20/167 (11%)

Query: 33  QNGSDNEAILEQRGGWNLSNQLQQGEGHFSRVEQDGDRNSAQTSQLSLDNHVEVLQSGSA 92
           Q G++  A + Q G  N  N  Q+G    + + Q G  N   T Q  + N +   Q+G+ 
Sbjct: 325 QFGTNQNATINQAGNGNGVNLTQKGADQLATLTQTGKGNQMSTKQDDVSNELYFEQNGTD 384

Query: 93  NQVTVVQVSDSFY--------GHSASIVQLGAANVAELEQAEGNGSQATIHQQGSGNTHR 144
           N +   Q     Y        G++ ++ Q G +N +   Q  G+G++ATI Q  S N   
Sbjct: 385 NILIADQRGTDNYAYGSSQGTGNTITLDQSGYSNQSYTNQLYGSGNEATIKQTDSINVAY 444

Query: 145 VEQLYYASRVDSRSSGTDNLTEITQNGAA-SATTQQFGSNNRITIEQ 190
           V Q            G  N   + Q+G A SAT  Q GS N  T+ Q
Sbjct: 445 VTQ-----------GGQSNKAFVDQSGVAQSATITQLGSANLATVTQ 480



 Score = 54.7 bits (130), Expect = 5e-12
 Identities = 38/109 (34%), Positives = 55/109 (50%), Gaps = 9/109 (8%)

Query: 25  VTSQAITTQNGSDNEAILEQRGGWNLSNQLQQGEGHFSRVEQDGDRNSAQTSQL-SLDNH 83
           V+++    QNG+DN  I +QRG  N +    QG G+   ++Q G  N + T+QL    N 
Sbjct: 372 VSNELYFEQNGTDNILIADQRGTDNYAYGSSQGTGNTITLDQSGYSNQSYTNQLYGSGNE 431

Query: 84  VEVLQSGSANQVTVVQ--------VSDSFYGHSASIVQLGAANVAELEQ 124
             + Q+ S N   V Q        V  S    SA+I QLG+AN+A + Q
Sbjct: 432 ATIKQTDSINVAYVTQGGQSNKAFVDQSGVAQSATITQLGSANLATVTQ 480