Pairwise Alignments

Query, 332 a.a., Predicted integral membrane protein from Pseudomonas stutzeri RCH2

Subject, 347 a.a., Inner membrane protein YbhN from Xanthobacter sp. DMC5

 Score = 94.0 bits (232), Expect = 5e-24
 Identities = 76/307 (24%), Positives = 143/307 (46%), Gaps = 21/307 (6%)

Query: 23  ILTYVFFALVVGLLIGLARNLDWQEVYNTLRNYKAQTLWMAGAAAFGSYVVYCFFDVLGK 82
           IL+ +       +L  +  NL W +V + LR    + + +A     G+Y+   F+D    
Sbjct: 26  ILSLIVIGFAAVVLYRMLHNLKWSDVLDALREKNPRDVAIAFFLVAGAYLTLTFYDWFAL 85

Query: 83  R-YARHDLPIRQILPVTFVCYA--FNLNLSAWVGGIALRFRLYSRFGLKPSQITRVFTMS 139
           R   +  +P R      F  Y+   N+  + + GG ++R+R+YS + L    + ++  ++
Sbjct: 86  RTIGKGHVPYRTAALAGFCSYSVGHNVGFTVFTGG-SVRYRIYSAWDLGAIDVAKICFVA 144

Query: 140 ILTNWLGYMWLAGMIFAMGWIKPPASWEIGFTALRILGGGLLVACLVYLGLCGFSK---- 195
            LT WLG + + G+   +      A  ++     R++G G L A + Y+     +     
Sbjct: 145 GLTFWLGNIAVLGLGITLHPEAATAVDQLPPFVNRLIGVGALCALVAYITWVSLAPRTIG 204

Query: 196 RRSWTIRGHEIQLPSLRLALIQLVLGAANWSLMALVVYYMFSQKAAYPEVLGILMI---S 252
           R +W      + LP     L+Q+ +G  + SL A  + YM    + Y + + + +I   +
Sbjct: 205 RSTWF-----VTLPRGPTTLLQVGIGILDLSLCAAAM-YMLMPASPYIDPISLSVIFVTA 258

Query: 253 SIAGVVTHIPAGLGVIEAVFVAMLADEMSKGAIVGGLIGYRVIYFLIPLLFATLVYVVLE 312
           ++ G  +H P GLGV +A  +  L  +  K  ++G L+ +R+ Y+++P  FA     +L 
Sbjct: 259 TLLGFASHAPGGLGVFDAALLVAL-PQFDKAELLGALLVFRLFYYIVPFAFA---LTLLG 314

Query: 313 ARAKKLR 319
           AR   LR
Sbjct: 315 ARELGLR 321