Pairwise Alignments

Query, 1099 a.a., exodeoxyribonuclease V, gamma subunit from Pseudomonas stutzeri RCH2

Subject, 1150 a.a., exodeoxyribonuclease V subunit gamma from Pseudomonas simiae WCS417

 Score =  492 bits (1266), Expect = e-143
 Identities = 380/1089 (34%), Positives = 528/1089 (48%), Gaps = 102/1089 (9%)

Query: 6    HAPDLETLGELATRLLAQPLADPFAPALVVVPSQGMGRWLTLELARKQ--------GIAM 57
            H   L+ L  L    + +    P    + +V S G+ +WL L LA           GIA 
Sbjct: 15   HGNRLDELRSLVVSWMRRYPLAPLENEIALVQSNGIAQWLKLALAEDPEDDDMGGCGIAA 74

Query: 58   QLEIQLPAKFVWDLSRTVLGS--LPEQSAFSPTTLTWRLYGWLCEPANLELAPRLAQYLD 115
             +++QLP  F+W L R VLG   +P +S      LTWRL   L E  +      L ++L 
Sbjct: 75   AIDVQLPGSFMWQLYRMVLGKDEIPPKSLLDKAPLTWRLMRLLPELIDQPHFEPLQRFLT 134

Query: 116  GG-DERRRLSLAAKIADVFDQYLLYRDDWLAAWE---------RGETFDLGPDEAWQALL 165
               D R+R  LA ++AD+FDQY +YR DWL  W          RGE+  L P   WQA L
Sbjct: 135  HDTDLRKRYQLAERLADLFDQYQVYRADWLEDWAAGRHQLRNGRGESKPLNPANCWQAEL 194

Query: 166  WRELTKDGHPH-----RARLLGDLLQRLYSDEPLP-GLPERLLVFGISSLPPHHLRVLDG 219
            WR L  D         RA +    ++R+ + E  P GLP R++VFGISSLP   L  L G
Sbjct: 195  WRALLLDVGEEGMAESRAGVHQRFIERINTLEKAPEGLPSRVIVFGISSLPAQALEALAG 254

Query: 220  LARHIDVVVCALNPSREAWGEI---RDI--RELARQPESGADDWYLDV------GHPLLA 268
            LAR   V++C  NP R  W +I   +D+   E  RQ         +D        HPLLA
Sbjct: 255  LARFSQVLLCVHNPCRHHWSDIVADKDLLRNEYKRQARKAGMPVTIDPQTLHQHAHPLLA 314

Query: 269  SLGKQGRDF------FDSLFSLTASEGSQEFGLYSEDEDLRDDSLLHALQNDILRLRTRQ 322
            + GKQGRD+      +D   S  A+       L+S+ E     +LL+ LQ+DIL LR   
Sbjct: 315  AWGKQGRDYISLLDSYDDPNSYRAAFRDGRIDLFSDSEPT---TLLNQLQDDILELRPLN 371

Query: 323  PDERI---VLAENDRSLEVHIAHSPLREVEILHDQLLARFATNPALTPDQVVVLTPDIER 379
                +   V  + D S+  HIAHS  REVEILHDQLL RF+ +P+L P  V+V+ PD++ 
Sbjct: 372  ETRELWPAVDLQRDTSIRFHIAHSAQREVEILHDQLLQRFSADPSLRPRDVIVMVPDVDS 431

Query: 380  YAPFIEAVFAPRE-GSPR-IPYSLADRSLRAEMPLIEAFLELLMLAQSRFTAEEVLAWLE 437
            YAP I AVF   E   PR IP++L D+  R   PL+ A   LL L  SRF   E+L  L+
Sbjct: 432  YAPHIRAVFGQLERNDPRFIPFTLTDQGQRGRDPLLIAVEHLLKLPDSRFPVSEILDLLD 491

Query: 438  QPAIARRAGIESEDLPLLRDWLRDAGVRWGRDGSQRARLGLPDE-SAFTWRQGLDRLLLG 496
             PA+  R  I+  DLP L  W+  AG+RWG +  QRA LGLP E    +WR GL R+LLG
Sbjct: 492  VPALRERFAIKERDLPTLHRWIEGAGIRWGLNAEQRAGLGLPKELEQNSWRFGLRRMLLG 551

Query: 497  FAAPPQLAGDHAPLLGEHWPLDALEGARGQLLGRLVEFVERLGVLADQLARPRPLAEWAD 556
            +A     A D         P D + G    L+G LV  ++ L      L+ P    +W +
Sbjct: 552  YAVGTGAACDGIE------PYDEIGGLDAALIGPLVALLDALSDAHQALSLPASPTQWGE 605

Query: 557  DLQILIDTLFDEREAGDTLLL--LSLACAALRDQAQAADLTRPIELELVHQQLSAALQQG 614
             LQ LI   F      D  LL  L        +  ++  L   + L +V +   A L QG
Sbjct: 606  RLQRLIQLFFLPSSEHDDYLLGQLEQLRETWLETCESVGLQDELPLTVVREAWLAGLDQG 665

Query: 615  GGASGFLTGAVTFCTMVPMRSLPFRVVCLLGLDDGAFPRRTPPSGFDLIGRHPRRGDRAR 674
              +  FL GAV FCT++PMR++PF+++CLLG++DG +PR  PP  FDL+G   R GDR+R
Sbjct: 666  RLSQRFLAGAVNFCTLMPMRAIPFKLICLLGMNDGDYPRAQPPLDFDLMGSDYRPGDRSR 725

Query: 675  RLDDRYLLLETLLSAREALYLSYVGRDPRDNAVLPPSVLLSEVLEAVDMTAELPVAQASE 734
            R DDRYLLLE LLSAR+ LY+S+VGR  RDN+  P SVL+ ++ + +          +  
Sbjct: 726  REDDRYLLLEALLSARDQLYVSWVGRSIRDNSDRPASVLIGQLRDHL---------ASGW 776

Query: 735  HTGESVPKTASQKILVAHPLQPFSPRNFGDG-LCTGFSSPWFRAAGRLAEPPQTQPQPFA 793
            H   S  K   + +   HPLQPFS R F +G     ++  W      L E     P    
Sbjct: 777  HLANS-DKPLIEAMTQEHPLQPFSARYFHEGDALFSYAREW----QLLHEASDALPTEH- 830

Query: 794  SLLAEPDEAWLTIEPSQLLQCFRHPARFLLEQRLGLRLADDQESLASDEPFDLEMPAWNG 853
             L     E  L++   QL    R+P +    QRL +     +  LA +EPF L+      
Sbjct: 831  DLAPHQQEEPLSL--GQLQDFLRNPVKHFFSQRLKVFFEAAEVPLADEEPFVLDALQRYS 888

Query: 854  LRRLSLQAMEHGWSDDDERRMACA-----AGWLPTGELGQALWGKLRGPVRAFAPR---L 905
            L    L A        D+   A A     +G LP    G+ L  +L  P+     R   L
Sbjct: 889  LSDSLLNAALTRPDQLDQTLNAQALRLQGSGLLPMVGFGECLRNELIEPLPDLLRRYQQL 948

Query: 906  FELRPDDVPEPLPVDITLAGVRVHGWLDGV---TPAGLFGW-----KLG--RLGEWD-LP 954
              L P       PV     GV++ GW+ G+   +  GL         +G  +  +W  L 
Sbjct: 949  LALWPTPHTGAEPVSFEHHGVQLEGWISGLHRRSDGGLLSVTTIPNSIGSIKTRKWHRLI 1008

Query: 955  PFWLRHLLLNLSATPGIERHSLMLSPAGDWQLGPL--ANAAGLLEPWLEAYRCAIREPLP 1012
              W+ H+   ++   G+   + +++      L PL  ANA  +L   L A+   + +PLP
Sbjct: 1009 RPWVNHV---VACACGLPLSTGLVASDDTLLLPPLDKANAQEVLGHLLLAWHAGMSKPLP 1065

Query: 1013 LLPRSSHAF 1021
            +  +++ A+
Sbjct: 1066 VAVKTAFAW 1074