Pairwise Alignments

Query, 1056 a.a., The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family from Pseudomonas stutzeri RCH2

Subject, 1062 a.a., multidrug efflux RND transporter permease subunit OqxB28 from Azospirillum sp. SherDot2

 Score = 1343 bits (3475), Expect = 0.0
 Identities = 681/1038 (65%), Positives = 829/1038 (79%), Gaps = 1/1038 (0%)

Query: 1    MNFSQFFIRRPIFAAVLSLVILIGGAISLFQLPISEYPEVVPPTVVVRANFPGANPKVIG 60
            MN S+FFI RPIFA VLS+ + + GAI++F+LPISEYPEVVPP+VVVRA FPGANPKVI 
Sbjct: 1    MNISKFFIDRPIFAGVLSVALFLAGAIAVFRLPISEYPEVVPPSVVVRAQFPGANPKVIA 60

Query: 61   ETVASPLEQAITGVEGMLYMSSQATADGKLTLTITFGLGTDLDNAQVQVQNRVTRTMPTL 120
            ETVASPLE+ I GVEGMLYM SQA +DG L LT+TF LGTD D AQ  VQNRV + MP L
Sbjct: 61   ETVASPLEEQINGVEGMLYMQSQANSDGNLALTVTFKLGTDPDKAQQLVQNRVAQAMPRL 120

Query: 121  PTEVQRLGVTVDKASPDLTMVVHLTSPDQRYDMLYLSNYAALNVKDELARLDGIGDVQLF 180
            P++VQRLGV   K+SP LTMVVHL SP+ RYDM YL NYA LNVKD L R+ G+G+VQ++
Sbjct: 121  PSDVQRLGVATVKSSPTLTMVVHLLSPNDRYDMTYLRNYAVLNVKDRLTRISGVGEVQVW 180

Query: 181  GMGDYSLRVWLDPEKVASRNLTASDVVNAIREQNRQVAAGSLGAPPAPGATDFQLSINTQ 240
            G GDY++RVWLDP KVA R LTA+DVVN+IREQN QVAAG +GA P+      QLSIN +
Sbjct: 181  GAGDYAMRVWLDPGKVAQRGLTATDVVNSIREQNVQVAAGVIGASPSLPDVPMQLSINAR 240

Query: 241  GRLVTEEEFENIIIRAGEDGSITRLRDIARVELGSSQYALRSLLNNQPAVAIPVFQRPGS 300
            GRL T +EF +I+++ G +G +TRLRD+ARVEL ++QY LRSLL+N+PAVA+ + Q P +
Sbjct: 241  GRLKTADEFGDIVLKTGGEGGVTRLRDVARVELAAAQYGLRSLLDNKPAVALGITQTPDA 300

Query: 301  NAIEISDSVRARMAELKRDFPEGVDYEIVYDPTIFVRGSIEAVVHTLLEAIVLVVLVVIL 360
            NA+ ISD VR  MAELK D P+GVDY IVYDPT FVR SIEAVVHTLLEA+ LVVLVVI+
Sbjct: 301  NALAISDEVRKVMAELKGDMPDGVDYSIVYDPTQFVRSSIEAVVHTLLEAVALVVLVVIV 360

Query: 361  FLQTWRASIIPLAAVPVSLIGTFAVMHLLGFSLNALSLFGLVLAIGIVVDDAIVVVENVE 420
            FLQTWRASIIPL AVP+S++GTF+++   GFS+NALSLFG+VLAIGIVVDDAIVVVENVE
Sbjct: 361  FLQTWRASIIPLLAVPISIVGTFSLLLAFGFSINALSLFGMVLAIGIVVDDAIVVVENVE 420

Query: 421  RNIGLGKSPEEATRQAMKEVTGPIIATALVLCAVFIPTAFISGLTGQFYQQFALTIAIST 480
            RNI  G S  +AT +AM+EV+GPIIA AL L AVF+P A ++GLTG+FY+QFA+TIAIST
Sbjct: 421  RNIASGLSARDATIRAMQEVSGPIIAIALTLVAVFVPLAAMTGLTGEFYKQFAMTIAIST 480

Query: 481  VISAFNSLTLSPALAAALLRSHDAPKDGFSRLLDRIFGGWLFAPFNRMFDRASHGYVGLV 540
            VISAFNSLTLSPALAA LLR HD P+D  +R ++R+FGG+ F  FNR+F RAS GY   V
Sbjct: 481  VISAFNSLTLSPALAAVLLRGHDEPQDWLTRAMNRVFGGF-FRLFNRVFHRASEGYGRGV 539

Query: 541  RRILRGSGIALVVYVGLVGLGYMGFASTPTGFVPPQDKQYLVAFAQLPDAATLDRTEDVI 600
              ++R  G+ L VY  L+G   +   S P+GFVP QDK+YL++FAQLP+ A+LDRTE VI
Sbjct: 540  GGVVRRKGVMLAVYALLIGATVLLGRSVPSGFVPMQDKEYLISFAQLPNGASLDRTEAVI 599

Query: 601  KRMSEIAGKHPGVENTVAFPGLSINGFTNSPNSGIVFTPLKPFDERKDPSLSANAIAADL 660
            + M++IA K PGV++ VAFPGLS+NGFTNS ++GIVF  LKPF ERKDPSLSA AIA DL
Sbjct: 600  REMTDIALKRPGVQSAVAFPGLSVNGFTNSSSAGIVFVTLKPFAERKDPSLSAGAIAMDL 659

Query: 661  NGQFAQIQDAFIAIFPPPPVQGLGTIGGFRVQVQDRGNLGYEELYSQVQNVIAKSADYPE 720
              ++A +++AF+AIFPPPPV GLG +GGF++Q++DRGNLGYE L   V   + ++A  PE
Sbjct: 660  QQRYAGLKEAFVAIFPPPPVMGLGQLGGFKMQLEDRGNLGYEALSDAVNAFVKRAAQTPE 719

Query: 721  LAGLFTSYQVNVPQVDADIDREKAKTHGVPIDEIFDTMQVYLGSLYANDFNRFGRTYQVN 780
            L   F++YQ+NVPQ+D D+DR KAK  GV + ++FDTMQ+YLGSLY NDFN FGR YQV 
Sbjct: 720  LGPTFSAYQINVPQLDVDLDRVKAKQLGVNVADVFDTMQIYLGSLYVNDFNAFGRVYQVR 779

Query: 781  VQADQKFRLAPEQIGQLKVRNNRGEMVPLSTFVNVTDSAGPDRVMHYNGFLTAEINGAAA 840
            VQAD  FR   + IG LK RN  G MVPLS+ V V    GP+ V+ YNGF  A++NG  A
Sbjct: 780  VQADAPFRDTADDIGVLKTRNAAGTMVPLSSLVTVQPGYGPEMVVRYNGFTAADVNGGPA 839

Query: 841  PGYSSGQAEAAMERLLKAELPNGMSYEWTELTYQQILAGNTAIFVFPLCVLLAFLVLAAQ 900
            PG+SSGQAEAA ER+    LP G+  EWT+LTYQ+IL GN  ++VFP+ VLL FLVLAAQ
Sbjct: 840  PGFSSGQAEAAAERIAAEVLPRGVKLEWTDLTYQKILVGNAGLWVFPISVLLVFLVLAAQ 899

Query: 901  YESWSLPLAVILIVPMTLLSAITGVILAGSDNNVFTQIGLIVLVGLACKNAILIVEFAKD 960
            YES +LPLA++LIVPM++LSA+ GV L G DNN+FTQIG +VLVGL+ KNAILIVEFA++
Sbjct: 900  YESLTLPLAILLIVPMSVLSALFGVWLTGGDNNIFTQIGFMVLVGLSAKNAILIVEFARE 959

Query: 961  KQEEGMDRLAAILEACRLRLRPILMTSFAFIMGVVPLVLSSGAGAEMRHAMGVAVFSGML 1020
             + EG   + A +EA RLRLRPILMTS AFIMGVVPLV SSGAGAEMRHAMGVAVF+GM+
Sbjct: 960  LEHEGRGVVQAAIEASRLRLRPILMTSIAFIMGVVPLVTSSGAGAEMRHAMGVAVFAGMI 1019

Query: 1021 GVTFFGLLLTPVFYLVIR 1038
            GVT FGL+LTPVFY+++R
Sbjct: 1020 GVTLFGLVLTPVFYVLLR 1037